CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1424..2045. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.202e-22
Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = -3
Query:  306 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 620
            RLH       PR+    ++I G+ VP   Q+ VNV+A+GRD   W+N   F P+RFL S+ DFKG+N+E IPFG+GRRICPG+ +   ++ + L +L+  FDW L
Sbjct:  361 RLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGL 465          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.875e-22
Identity = 56/141 (39.72%), Postives = 76/141 (53.90%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNA----DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR   +  ++ GF V KG +V VN WA+ R    W +P  F PERF    GS+A    D++G  FE IPFG+GRR+CPG    +  L LM+  L+  FDW L +      +DM+   G T+++   LH VP
Sbjct:  367 RLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHLHLVP 507          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTW-DNPHTFIPERFLGSN--ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RL         R+   D +I G+ +P    + VN WA+ RD + W DNP+ FIPERF+  +   DFKGQ+FEL+PFG+GRR+CP + L I M+ +   +L+  FDW L       ++ M+   GL + K + L   P
Sbjct:  359 RLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAP 495          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22
Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = -3
Query:  306 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 620
            RLH       PR+    V+I G+ +P   Q+ +N +AI RD   W NP  F P+RFL S+ D++G NFEL+PFG+GRRICPG+ + I ++ L L +L+  FDW L
Sbjct:  361 RLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGL 465          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = -3
Query:  264 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLT 587
            R   ++  + G+T+P  A++ +NVW++GR+   W+ P TF PERF   + DF G +FE +PFGAGRRICPGL   +  + + L  L+  FDWKL       +MDM +  GLT
Sbjct:  369 RSCREECVVNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSKDFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLT 480          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.366e-22
Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDW-KLDNHNMDMEDKFGLTVQKAQPLHAV 620
            RLH       P  A++D +I  + +P+G  + VN WAI RD +TWD+P +F PERF     + + +  +L+ FG GRR CPG  LA R++ L LGSLI  F+W ++ N  +DM++  G TV KA PL A+
Sbjct:  366 RLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERF-----EKEEEAQKLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNVEVDMKEGVGNTVPKAIPLKAI 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.366e-22
Identity = 52/137 (37.96%), Postives = 80/137 (58.39%), Query Frame = -3
Query:  225 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVPGA 620
            RL        PR  ++DV + G+ +P G QV +N WAI RD +TW  +   F PER L S  DF+GQ+F+ IPFG+G+RICPG+     ++ + L +++  F+W++D        D+ +  GL V +  PL A+P +
Sbjct:  353 RLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTWGIDAEEFRPERHLDSILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIPSS 489          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.093e-21
Identity = 50/138 (36.23%), Postives = 80/138 (57.97%), Query Frame = -3
Query:  222 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVPGAI 620
            R+H       PR  ++DV++ G+ +  G +V +N WAI RD + W  +   F PER L S  D+ G++   IPFG+GRRICPG+ LA+ ++ + + +L+  FDW+ +        D+ + FGL V +  PL A P ++
Sbjct:  359 RVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGLDVCRKFPLIAFPSSV 496          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.427e-21
Identity = 53/129 (41.09%), Postives = 78/129 (60.47%), Query Frame = -3
Query:  243 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN--ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD-WKLDNHNMDMEDKFGLTVQKAQPL 620
            RL+       PR+ T++  + G+ + KG ++  N+W I RD S W +P  F PERFL ++   D +G NFEL+PFG+GRR+C G+ L + M+H  L +L++SFD        +DM + FG T  KA PL
Sbjct:  383 RLYPPAPFSSPREFTENCILGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFGFTNTKATPL 511          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.427e-21
Identity = 50/138 (36.23%), Postives = 79/138 (57.25%), Query Frame = -3
Query:  222 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVPGAI 620
            RLH       PR  ++DV++ G+ +  G +V +N WAI RD + W  +   F PER L S  D+ G+N   IPFG+GRRICPG+ LA+ +  + + +L+  FDW+++        D+ +  G+ V +  PL A P ++
Sbjct:  359 RLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIGIDVCRKFPLIAFPSSV 496          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C71BF_ARATH2.202e-2245.71Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI2.875e-2239.72Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C83B1_ARATH3.755e-2238.69Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH3.755e-2245.71Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71DF_MENPI4.905e-2242.86Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C81D1_ARATH8.366e-2243.08Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C71AJ_ARATH8.366e-2237.96Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.093e-2136.23Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C82A3_SOYBN1.427e-2141.09Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71AD_ARATH1.427e-2136.23Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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