CB305046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_CHLRE (40S ribosomal protein S3a OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_168484 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.086e-46 Identity = 89/124 (71.77%), Postives = 105/124 (84.68%), Query Frame = -1 Query: 278 YVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPA 649 +VDVKTTD YTLR+FCI FTK+ Q+KRTCYAQ++QIRQIR+KM EI+ +A SCDLK LV KFI E IG++IEK+ IYPLQN FIRKVK+LKAPKFD+ KLMEVHGDYSE+VG K+ERPA Sbjct: 124 HVDVKTTDGYTLRVFCISFTKKRQGQIKRTCYAQSAQIRQIRKKMMEIITREATSCDLKELVAKFIPESIGKDIEKSCQGIYPLQNTFIRKVKVLKAPKFDITKLMEVHGDYSEEVGAKIERPA 247
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A2_VITVI (40S ribosomal protein S3a-2 OS=Vitis vinifera GN=GSVIVT00031140001 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.264e-44 Identity = 91/107 (85.05%), Postives = 96/107 (89.72%), Query Frame = -1 Query: 329 YVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLME 649 +VDVKTTDNYTLRMFCI FTK+ NQ K+T YAQ+SQIRQIRRKMREIM QAASCDLK LV KFI E+IGREIEKAT SIYPLQNVFIRKVKILKAPKFDLGKLME Sbjct: 124 HVDVKTTDNYTLRMFCIAFTKKRQNQNKKTSYAQSSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 230
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_OSTLU (40S ribosomal protein S3a OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28528 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.044e-44 Identity = 90/131 (68.70%), Postives = 105/131 (80.15%), Query Frame = -1 Query: 260 YVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPE 649 +VDVKTTD YTLR+FCIGFTKR +Q KRTCYAQ++QIR+IR KM EI+ + +CDLK LV KFI E+IG+EIEK+ IYPLQNV+IRKVKILKAPKFDL KLMEVHGDYS E VG + RP +E E Sbjct: 124 FVDVKTTDGYTLRVFCIGFTKRRMDQAKRTCYAQSAQIRKIRAKMVEIITRECTTCDLKELVLKFIPEVIGKEIEKSCAGIYPLQNVYIRKVKILKAPKFDLTKLMEVHGDYSGEAVGEAVARPVEEKAEE 254
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_LENED (40S ribosomal protein S1 OS=Lentinula edodes GN=RPS1 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42 Identity = 81/127 (63.78%), Postives = 104/127 (81.89%), Query Frame = -1 Query: 269 YVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEP 649 +VDVKTTD Y LR+F IGFTKR P QV++T YAQ+SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA+ SIYPLQNV++RK KILKAPKFD+ KLME+HG+ +++ G K+ + EP Sbjct: 124 HVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYVRKAKILKAPKFDVSKLMELHGESTDETGTKIAKDFKEP 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_LACBS (40S ribosomal protein S1 OS=Laccaria bicolor (strain S238N-H82) GN=RPS1 PE=3 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 4.721e-42 Identity = 79/127 (62.20%), Postives = 104/127 (81.89%), Query Frame = -1 Query: 269 YVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEP 649 +VDVKTTD Y LR+F IGFTKR P+QV++T YAQ+SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA SIYPLQNV++RK KILK+PKFD+ KL+E+HGD +++ G ++ + EP Sbjct: 124 HVDVKTTDGYLLRLFAIGFTKRRPSQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAARSIYPLQNVYVRKAKILKSPKFDMSKLLELHGDSTDETGTRIAKDFKEP 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_POSPM (40S ribosomal protein S1 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS1 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.165e-42 Identity = 82/127 (64.57%), Postives = 102/127 (80.31%), Query Frame = -1 Query: 269 YVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEP 649 +VDVKTTD Y LR+F IGFTKR P QV++T YAQ+SQIRQIR+KM EIM +A+SCDLK LV+KFI E IGREIEKA IYPLQNVF+ K KILKAPKFD+ KL+E+HG+ +++ G ++ + EP Sbjct: 124 HVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQIRQIRQKMFEIMTREASSCDLKELVQKFIPEAIGREIEKAARGIYPLQNVFVHKAKILKAPKFDMSKLLELHGESTDETGTRVVKDFKEP 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.052e-41 Identity = 80/127 (62.99%), Postives = 103/127 (81.10%), Query Frame = -1 Query: 269 YVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEP 649 +VDVKTTD Y LR+F IGFTKR P QVK+T YAQ +Q+R++R+KM EI+ +A SCDLK LV+KF+ E IGREIEKA+ SIYPLQNV+IRK KILKAPKFD+ KL+E+HGD +++ G ++ + EP Sbjct: 124 HVDVKTTDGYLLRLFAIGFTKRRPTQVKKTTYAQTAQVRELRKKMFEIITREATSCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYIRKAKILKAPKFDVSKLLELHGDSTDESGTRVTKDFKEP 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_PYRTR (40S ribosomal protein S1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=rps1 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39 Identity = 84/130 (64.62%), Postives = 100/130 (76.92%), Query Frame = -1 Query: 260 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPE 646 V VKTTD+Y LR+FCI FTKR PNQVK+T YAQ+SQIR IR+KM EIM A+SC L L +K I E+IGREIEKAT IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S +D G K+ER E + E Sbjct: 124 VVVKTTDDYLLRLFCIAFTKRRPNQVKKTTYAQSSQIRAIRKKMVEIMARDASSCTLAQLTQKLIPEVIGREIEKATQGIYPLQNVHVRKVKLLKAPKFDLGALLGLHGESSQDDSGQKVEREFKETVLE 253
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_ASPCL (40S ribosomal protein S1 OS=Aspergillus clavatus GN=rps1 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.856e-38 Identity = 82/131 (62.60%), Postives = 100/131 (76.34%), Query Frame = -1 Query: 257 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKMERPADEPIPEA 646 V VKTTD+Y LR+F I FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I E+IGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G K+ER E + E+ Sbjct: 125 VTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCSLAQLTHKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLES 255
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_ASPOR (40S ribosomal protein S1 OS=Aspergillus oryzae GN=rps1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.166e-38 Identity = 82/131 (62.60%), Postives = 100/131 (76.34%), Query Frame = -1 Query: 257 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKMERPADEPIPEA 646 V VKTTD+Y LR+F I FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I E+IGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G K+ER E + E+ Sbjct: 125 VTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCTLSQLTTKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGHKVEREFKEQVLES 255 The following BLAST results are available for this feature:
BLAST of CB305046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305046 ID=CB305046; Name=CB305046; organism=Citrus sinensis; type=EST; length=649bpback to top |