CB305046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A1_CLAL4 (40S ribosomal protein S1-A OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1A PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.749e-31 Identity = 69/120 (57.50%), Postives = 90/120 (75.00%), Query Frame = -1 Query: 290 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKM 646 V VKT D+Y LR+F I FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I E+IGREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G K+ Sbjct: 125 VTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_PERAM (40S ribosomal protein S3a OS=Periplaneta americana GN=Parcxpwex01 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 67/134 (50.00%), Postives = 94/134 (70.15%), Query Frame = -1 Query: 260 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPA--DEPIPE 646 VDVKTTD Y LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ S DLK +V K + + I ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G +++RP + P+ E Sbjct: 128 VDVKTTDGYLLRVFCIGFTNKDQMSQRKTCYAQHTQVRAIRKKMVEIITRDVTSSDLKEVVNKLLPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGGSDEPGARVDRPEGYEPPVQE 261
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_BRUMA (40S ribosomal protein S3a OS=Brugia malayi GN=Bm1_27225 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 70/131 (53.44%), Postives = 92/131 (70.23%), Query Frame = -1 Query: 263 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPADEPIP 646 V VKT+D Y LR+FCIGFTK+ Q+K+T YA++S+IRQIR KM E M + DLK + K + + IG++IEKA IYPLQ+V IRKVKILK PKF++G+LME+H D ++ G K+ERP D P Sbjct: 122 VAVKTSDGYLLRLFCIGFTKKNARQLKKTSYAKSSKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKACSYIYPLQDVCIRKVKILKKPKFEIGRLMEMHTDVSTFTSAEGEKIERPDDYEPP 252
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 64/110 (58.18%), Postives = 85/110 (77.27%), Query Frame = -1 Query: 317 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 646 V VKT D+Y LR+F + FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I E+IGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ Sbjct: 125 VTVKTADDYVLRVFALAFTKRQANQVKKTTYAQSSKLREVRKKMSEIMQREVSAVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKVLKQPKFDLGALLALHGE 234
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_ZYGRC (40S ribosomal protein S1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS1 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.091e-30 Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = -1 Query: 272 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADE 646 V VKT+D Y +R+F I FT++ PNQVK+TCYAQ+S IR IR+ EI+ + + L K I E+I +E+E AT I+PLQNV +RKVK+LK PKFDLG LM +HG+ S++ G K+ DE Sbjct: 125 VTVKTSDEYVIRVFAIAFTRKQPNQVKKTCYAQSSHIRAIRKVFSEILTREVQNSTLAQFTSKLIPEVINKEMENATKDIFPLQNVHVRKVKLLKQPKFDLGSLMALHGEGSDETGKKVSGFKDE 249
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_ARTSF (40S ribosomal protein S3a OS=Artemia sanfranciscana PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.091e-30 Identity = 68/140 (48.57%), Postives = 96/140 (68.57%), Query Frame = -1 Query: 257 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKMERPA--DEPIPEA 646 VDVKTTD+Y LR+FCIGFT++ ++TCYAQ +Q+R IR+KM EI+ + +S DLK V K I + I ++IEK+ SIYP+ V+IRKVK+LK PKFD+GKL+++HG+ + GV + RP + PI E+ Sbjct: 128 VDVKTTDSYLLRVFCIGFTQKDQRSQRKTCYAQHTQVRAIRKKMTEIITKEISSGDLKEAVSKLIPDSIAKDIEKSCHSIYPIHEVYIRKVKVLKKPKFDMGKLLDMHGEGAVTKRVTTEDGTGVVISRPEGYEPPIQES 267
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_TRIIF (40S ribosomal protein S3a OS=Triatoma infestans PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.430e-30 Identity = 66/134 (49.25%), Postives = 96/134 (71.64%), Query Frame = -1 Query: 257 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--YSEDVGVKMERPA--DEPIPEA 646 VDV+TTD Y LR+FCIGFT + ++TCYAQ +Q+RQIRRKM + + + ++ DL+ +V K I + I ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G K+ RP + P+ E+ Sbjct: 128 VDVRTTDGYLLRVFCIGFTNKDQLSQRKTCYAQHTQVRQIRRKMVDNITSSISNSDLRVVVNKLIPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGSDEPGAKVSRPEAYEPPVQES 261
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_PICPG (40S ribosomal protein S1 OS=Pichia pastoris (strain GS115) GN=RPS1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = -1 Query: 290 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKM 646 V VKT D+Y LR+FCI FT+R NQ+K+T YAQ+SQ+ IR+KM EIM + ++ L L K I E+IGREIEKA IYPLQNV IRKVK+LK KFDLG L+ +HG+ +E+ G K+ Sbjct: 125 VTVKTADDYVLRIFCIAFTRRHQNQIKKTTYAQSSQLSAIRKKMVEIMQREVSNVTLAQLTSKLIPEVIGREIEKAAEGIYPLQNVHIRKVKVLKQAKFDLGALLALHGESVTEENGKKV 244
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_LACTC (40S ribosomal protein S1 OS=Lachancea thermotolerans (strain CBS 6340) GN=RPS1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.071e-30 Identity = 67/120 (55.83%), Postives = 84/120 (70.00%), Query Frame = -1 Query: 290 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKM 646 V VKT D Y LR+F I FT+R PNQVK+ CYAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ Sbjct: 125 VTVKTADEYVLRVFAIAFTRRQPNQVKKACYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGEASGEEKGKKV 244
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_BIPLU (40S ribosomal protein S3a OS=Biphyllus lunatus PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.234e-30 Identity = 65/138 (47.10%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 257 DVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------DVGVKMERPA--DEPIPEA 643 DVKTTD Y LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ + DLK +V K + + I ++IEKA+ IYPL +V+IRKVK+LK P+F+L KL+E+HGD + + G K+++P + P+ EA Sbjct: 129 DVKTTDGYLLRVFCIGFTNKDQLSQRKTCYAQHTQVRSIRKKMVEIITRDISGSDLKEVVNKLLPDSIAKDIEKASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDSGKGGSGEPGEAGSKVDKPEGYEPPVQEA 266 The following BLAST results are available for this feature:
BLAST of CB305046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305046 ID=CB305046; Name=CB305046; organism=Citrus sinensis; type=EST; length=649bpback to top |