CB305046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMO (40S ribosomal protein S3a OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.742e-28 Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = -1 Query: 257 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPA--DEPIPEA 646 +DVKTTD Y LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K ERP + P+ E+ Sbjct: 128 IDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKGEAGDKSERPEGYEPPVQES 262
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_ASHGO (40S ribosomal protein S1 OS=Ashbya gossypii GN=RPS1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.742e-28 Identity = 65/120 (54.17%), Postives = 84/120 (70.00%), Query Frame = -1 Query: 290 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKM 646 V VKT D+Y LR+F I FT+R NQ+K+T YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ Sbjct: 125 VTVKTADDYVLRVFAIAFTRRQSNQIKKTSYAQSSHIRAIRKVISEILTREVQNATLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGESSGEEKGKKV 244
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_CAEEL (40S ribosomal protein S3a OS=Caenorhabditis elegans GN=rps-1 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.275e-28 Identity = 67/129 (51.94%), Postives = 88/129 (68.22%), Query Frame = -1 Query: 263 VKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KMERPADEPIP 640 VKTTD YTLR+F I FTK+ NQVK+T Y + S+IR+IR +M + + CDLK +V K I + IG++IEK +YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG K++RP D P Sbjct: 125 VKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_CANGA (40S ribosomal protein S1 OS=Candida glabrata GN=RPS1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.880e-28 Identity = 65/126 (51.59%), Postives = 86/126 (68.25%), Query Frame = -1 Query: 272 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 646 V VKT+D Y +R+F I FT++ NQVKRT YAQ+S IR IR+ + +I+ + ++ L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ DE Sbjct: 125 VTVKTSDEYIIRVFAIAFTRKQSNQVKRTAYAQSSHIRAIRKVISDILTREVSNSTLAQFTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSAEEKGKKVSGFKDE 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_DROWI (40S ribosomal protein S3a OS=Drosophila willistoni GN=RpS3A PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.129e-27 Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = -1 Query: 257 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV----GVKMERPA--DEPIPEA 646 V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD SE V G ++RP + P+ EA Sbjct: 128 VEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIINNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDISKLLELHGDGGGKTSEAVVSAEGAVVDRPEGYEPPVQEA 267
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A_DROVI (40S ribosomal protein S3a OS=Drosophila virilis GN=RpS3A PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.474e-27 Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = -1 Query: 317 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 646 V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD Sbjct: 128 VEAKTVDGYLLRVFCIGFTSKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 237
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAST (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae GN=RPS1B PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.474e-27 Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = -1 Query: 272 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 646 V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 125 VTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS7 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1B PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.474e-27 Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = -1 Query: 272 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 646 V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 125 VTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS6 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1B PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.474e-27 Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = -1 Query: 272 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 646 V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 125 VTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
BLAST of CB305046 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS1 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1B PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.474e-27 Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = -1 Query: 272 VDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 646 V VKT+D+Y LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G K+ DE Sbjct: 125 VTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250 The following BLAST results are available for this feature:
BLAST of CB305046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305046 ID=CB305046; Name=CB305046; organism=Citrus sinensis; type=EST; length=649bpback to top |