CB305049
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5A2_HUMAN (Eukaryotic translation initiation factor 5A-2 OS=Homo sapiens GN=EIF5A2 PE=1 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 3.379e-20 Identity = 50/97 (51.55%), Postives = 71/97 (73.20%), Query Frame = -3 Query: 295 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALK 585 VH VGIDIF+GKK EDI PS+HN DVP++ R DYQLI I +DG++SLLTE G ++DL+LP E L +++ + G+D+ ++VM +M +E A+K Sbjct: 56 VHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5A2_CHICK (Eukaryotic translation initiation factor 5A-2 OS=Gallus gallus GN=EIF5A2 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 4.225e-20 Identity = 49/97 (50.52%), Postives = 72/97 (74.23%), Query Frame = -3 Query: 295 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALK 585 VH VGIDIF+GKK EDI PS+HN DVP++ R DYQLI I +DG++SLLTE+G ++DL+LP + L +++ F +D+ ++V+S+M +E A+K Sbjct: 56 VHLVGIDIFNGKKYEDICPSTHNMDVPNIKRNDYQLIGI-QDGYLSLLTESGEVREDLKLPEGD-LGKEIEGKFNANEDVQISVISAMNEECAVAIK 150 HSP 2 Score: 21.557 bits (44), Expect = 4.225e-20 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = -1 Query: 573 GKHGHAKCTLL 605 GKHGHAK L+ Sbjct: 49 GKHGHAKVHLV 59
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5A1_RABIT (Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus GN=EIF5A PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 7.528e-20 Identity = 47/97 (48.45%), Postives = 73/97 (75.26%), Query Frame = -3 Query: 295 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALK 585 VH VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M +E A+K Sbjct: 56 VHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDSGEEILITVLSAMTEEAAVAIK 150
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5A1_RAT (Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus GN=Eif5a PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 2.190e-19 Identity = 47/97 (48.45%), Postives = 73/97 (75.26%), Query Frame = -3 Query: 295 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALK 585 VH VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M +E A+K Sbjct: 56 VHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5A1_MOUSE (Eukaryotic translation initiation factor 5A-1 OS=Mus musculus GN=Eif5a PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.190e-19 Identity = 47/97 (48.45%), Postives = 73/97 (75.26%), Query Frame = -3 Query: 295 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALK 585 VH VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M +E A+K Sbjct: 56 VHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5A1_HUMAN (Eukaryotic translation initiation factor 5A-1 OS=Homo sapiens GN=EIF5A PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.190e-19 Identity = 47/97 (48.45%), Postives = 73/97 (75.26%), Query Frame = -3 Query: 295 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALK 585 VH VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M +E A+K Sbjct: 56 VHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5A1_BOVIN (Eukaryotic translation initiation factor 5A-1 OS=Bos taurus GN=EIF5A PE=2 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 2.190e-19 Identity = 47/97 (48.45%), Postives = 73/97 (75.26%), Query Frame = -3 Query: 295 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALK 585 VH VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + L +++ + G+++++TV+S+M +E A+K Sbjct: 56 VHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5AL_HUMAN (Eukaryotic translation initiation factor 5A-1-like OS=Homo sapiens GN=EIF5AL1 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 4.880e-19 Identity = 47/97 (48.45%), Postives = 72/97 (74.23%), Query Frame = -3 Query: 295 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALK 585 VH VGIDIF+GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G +DLRLP + L +++ + G+++++TV+S+M +E A+K Sbjct: 56 VHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVPEDLRLPEGD-LGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5A_NEUCR (Eukaryotic translation initiation factor 5A OS=Neurospora crassa GN=tif-51 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 6.204e-18 Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = -3 Query: 280 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALKDIGPK 585 VH V IDIF+GKKLED+ PS+HN DVP+V RTDYQ I ED F+ L+ NG K D+++P E L +++ EGKD + V ++MG+E +K+ K Sbjct: 63 VHLVAIDIFTGKKLEDLCPSTHNMDVPNVKRTDYQFSYIDED-FLVLIDSNGEEKRDVKMPEGE-LAKRIEKLEEEGKDFFVGVQTAMGEEAAIDVKEASNK 162 HSP 2 Score: 21.9422 bits (45), Expect = 6.204e-18 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = -1 Query: 567 GKHGHAKCTLLEL 605 GKHGHAK L+ + Sbjct: 56 GKHGHAKVHLVAI 68
BLAST of CB305049 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.017e-16 Identity = 42/97 (43.30%), Postives = 70/97 (72.16%), Query Frame = -3 Query: 295 VHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNPKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGKEQICALK 585 V+ IDIF+GKK E+I PS+HN DVP+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + ++ EGK+ +++V+S++GKE + ++K Sbjct: 61 VNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155 The following BLAST results are available for this feature:
BLAST of CB305049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305049 ID=CB305049; Name=CB305049; organism=Citrus sinensis; type=EST; length=605bpback to top |