CB305054

Overview
NameCB305054
Unique NameCB305054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:632..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.723e-14
Identity = 45/106 (42.45%), Postives = 58/106 (54.72%), Query Frame = -3
Query:  150 GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAASYPQFI 467
            G S   GL  E+ GT VL  TV      KR         +A LPIG ++FM H+A    TGTG+NPARSLGAAV       +   W++W+GP +GA +A S  Q +
Sbjct:  170 GCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLAWSVWQLL 268          
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.723e-14
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = -3
Query:  165 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAS 461
            + G G+  E + TF+LV+ V    D +RS     +   APL IG ++   HL+ I  TG  +NPARS G AV+      W DQW++WVGP +G  +A +
Sbjct:  140 TAGQGVMIEALITFILVFVVHGVCDNRRS----DIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGA 231          
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.556e-14
Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = -3
Query:  168 STGVG----LAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAA 461
            S GVG    +  EI+ TF LVYTV++ A DPK+      + V+AP+ IGF V    LA     G  +NPA S G AV+      WD+ W++W+GPF+GAAIAA
Sbjct:  136 SAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAA 231          
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.066e-14
Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = -3
Query:  141 LADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAASYPQFILRA 476
            LA G +  +G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G AV  N D  W + W++W GP +G  +A    + + RA
Sbjct:  138 LAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.922e-14
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = -3
Query:  168 LADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAA 476
            L +  + G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AV+ N+       W+FWVGP +GAA+AA
Sbjct:  122 LNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAAVAA 218          
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.035e-13
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = -3
Query:  171 LADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIA 476
            L++G   G  L  EI+ TF LVYTV++ A DPK+     ++ ++AP+ IGF V    L     TG  +NPA S G AV+     +W + W++W GP IG  IA
Sbjct:  134 LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIA 229          
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.035e-13
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = -3
Query:  171 LADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIA 476
            L++G   G  L  EI+ TF LVYTV++ A DPK+     ++ ++AP+ IGF V    L     TG  +NPA S G AV+     +W + W++W GP IG  IA
Sbjct:  133 LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIA 228          
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.035e-13
Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = -3
Query:  168 LADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAA 476
            L++  + G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AV+ N+       W+FWVGP +GA +AA
Sbjct:  122 LSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAVLAA 218          
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.351e-13
Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = -3
Query:  168 LADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAA 476
            L +  + G  + AE+I TF L   VFS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AVI ++  +    W+FWVGP +GAA AA
Sbjct:  122 LNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAA 218          
BLAST of CB305054 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.351e-13
Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = -3
Query:  147 LADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAASYPQFIL 476
            L +  + G  +  E+  T  LV  +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARSL  A++  K   +DD W+FW+GP +GA +A+    ++L
Sbjct:  121 LNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
The following BLAST results are available for this feature:
BLAST of CB305054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
AQY2_YEAST2.723e-1442.45Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQP_AEDAE2.723e-1439.39Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP12_ORYSJ3.556e-1445.63Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP_CICVR6.066e-1437.50Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP5_PIG7.922e-1442.31Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
TIP1_MEDTR1.035e-1340.78Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP1_MEDSA1.035e-1340.78Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
AQP5_MOUSE1.035e-1341.35Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_SHEEP1.351e-1344.23Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP2_SHEEP1.351e-1336.36Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_D10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_D10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305054 ID=CB305054; Name=CB305054; organism=Citrus sinensis; type=EST; length=478bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGATTTTAAATCATTAAC
CCCATGAAGATGTGGATAATCCACTTGTCGAAGAAACTAAAATCAGACAC
GGGATTGGCTCCTGAATGAACCAAGAGCCTTGACAGCTCCAGCTCTCAAG
ATGAATTGGGGGTAGGAAGCTGCAATTGCTGCACCAATGAAGGGTCCAAC
CCAGAAGAGCCATTGATCATCCCAAGCCTTGTCCTTGTTGTAAATAACAG
CGGCCCCGAGACTCCTTGCTGGGTTAATGCCAGTGCCAGTGATTGGGATT
GTGGCCAAGTGTACCATGAACACAGCAAATCCAATGGGGAGCGGTGCCAA
AACGGGAACGTGGGAGTCTCTGGCGCTTCTCTTGGGATCAGTGGCCGAGA
AGACAGTGTAAACCAAGACAAAGGTGCCGATGATCTCGGCGGCCAATCCA
ACGCCGGTGCTGTACCCATCGGCCAGCT
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