CB305055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.303e-13 Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 D VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 24 DRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.314e-13 Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 D +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 24 DRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.314e-13 Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 D +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 24 DRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 4.314e-13 Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 D +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 24 DRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_CAEBR (40S ribosomal protein S27a OS=Caenorhabditis briggsae GN=ubl-1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.635e-13 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = -3 Query: 164 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQKA 325 LAVL++YKVD++GK+ RLRKEC CG G FMA H +RHYCG+C T V A Sbjct: 24 LAVLKYYKVDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_CAEEL (40S ribosomal protein S27a OS=Caenorhabditis elegans GN=ubl-1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.359e-13 Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = -3 Query: 164 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQKA 325 LAVL++YK+D++GK+ RLRKEC CG G FMA H +RHYCG+C T V A Sbjct: 24 LAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.612e-13 Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 + +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL LRGG Sbjct: 24 ERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27B_SCHPO (40S ribosomal protein S27b OS=Schizosaccharomyces pombe GN=ubi5 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.255e-12 Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = -3 Query: 182 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLT 325 LAVL++YKV+D G V+RLR+ECPN CGA FMANH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_SCHPO (40S ribosomal protein S27a OS=Schizosaccharomyces pombe GN=ubi3 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.255e-12 Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = -3 Query: 182 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLT 325 LAVL++YKV+D G V+RLR+ECPN CGA FMANH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS37_YEAST (40S ribosomal protein S31 OS=Saccharomyces cerevisiae GN=UBI3 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.639e-12 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = -3 Query: 179 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTY 325 LAVL +YKVD GKV +LR+EC N CGAG F+ANH DR YCGKC Y Sbjct: 24 LAVLSYYKVDAEGKVTKLRRECSNPTCGAGVFLANHKDRLYCGKCHSVY 72 The following BLAST results are available for this feature:
BLAST of CB305055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305055 ID=CB305055; Name=CB305055; organism=Citrus sinensis; type=EST; length=555bpback to top |