CB305055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_MOUSE (40S ribosomal protein S27a OS=Mus musculus GN=Rps27a PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.454e-18 Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = -3 Query: 167 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQK 325 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FM +HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNK 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.598e-18 Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = -3 Query: 395 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 547 VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 26 VKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 7.598e-18 Identity = 42/52 (80.77%), Postives = 48/52 (92.31%), Query Frame = -3 Query: 395 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 550 ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 25 DLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_DROME (40S ribosomal protein S27a OS=Drosophila melanogaster GN=RpS27A PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.925e-17 Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = -3 Query: 167 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQK 325 LAVL++YKVD++GK+ RLR+ECP CGAG FMA H DRHYCGKC LT+V+ K Sbjct: 24 LAVLKYYKVDENGKIHRLRRECPGENCGAGVFMAAHEDRHYCGKCNLTFVFSK 76
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_NEUCR (40S ribosomal protein S27a OS=Neurospora crassa GN=ubi-3 PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.213e-15 Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = -3 Query: 164 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQKA 325 LAVL++YKVD GK++RLR+ECPN CGAG FMA DR YCG+C LTYV++K+ Sbjct: 24 LAVLKYYKVDSDGKIERLRRECPNETCGAGVFMAAMQDRQYCGRCHLTYVFEKS 77
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_KLULA (40S ribosomal protein S27a OS=Kluyveromyces lactis GN=ubi3 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.096e-14 Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = -3 Query: 167 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQK 325 LAVL +YKVDD GKV +LRKECPN CG G F+ANH DR YCGKC T+ QK Sbjct: 24 LAVLNYYKVDDEGKVAKLRKECPN--CGPGIFLANHGDRFYCGKCHSTFATQK 74
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_PLUXY (40S ribosomal protein S27a OS=Plutella xylostella PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-13 Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = -3 Query: 170 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQ 325 LAVL+FYKVD++GK+ RLR+EC + +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTSEQCGAGVFMAVMEDRHYCGKCHRTMVFK 75
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_SPOFR (40S ribosomal protein S27a OS=Spodoptera frugiperda PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.483e-13 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = -3 Query: 170 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQ 325 LAVL+FYKVD++GK+ RLR+EC +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: RS27A_MANSE (40S ribosomal protein S27a OS=Manduca sexta PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.483e-13 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = -3 Query: 170 LAVLQFYKVDDSGKVQRLRKECPNAECGAGPFMANHFDRHYCGKCGLTYVYQ 325 LAVL+FYKVD++GK+ RLR+EC +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CB305055 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.937e-13 Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = -3 Query: 395 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 553 D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLVL LRGG Sbjct: 24 DRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGG 76 The following BLAST results are available for this feature:
BLAST of CB305055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305055 ID=CB305055; Name=CB305055; organism=Citrus sinensis; type=EST; length=555bpback to top |