CB305063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.001e-29 Identity = 74/179 (41.34%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAFFA +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+WFWMT H V+ GF ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 125 AAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 303
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.708e-29 Identity = 75/179 (41.90%), Postives = 93/179 (51.96%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAFFA +HETT +C++ E+ +C S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFKTALWFWMT H V+ GF ING ECG ++V DR+ Y YC GV PG L+C Sbjct: 135 AAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDC 313
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.708e-29 Identity = 73/179 (40.78%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAFFA +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D +ISFK+A+WFWMT H V+ GF ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 123 AAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 301
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.231e-29 Identity = 75/179 (41.90%), Postives = 93/179 (51.96%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAFFA +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALWFWMT H V+ GF ING ECG +V DR+ Y YC GV PG L+C Sbjct: 131 AAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 309
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.231e-29 Identity = 75/179 (41.90%), Postives = 93/179 (51.96%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAFFA +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALWFWMT H V+ GF ING ECG +V DR+ Y YC GV PG L+C Sbjct: 136 AAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 314
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.914e-29 Identity = 71/178 (39.89%), Postives = 95/178 (53.37%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAF A +HETT +C++ E+N + +C+ +PCA GK YYGRGPIQLT N NY AG+AI D +N+P+ ++ + +SFKTA+WFWMT H V+ G+ ING ECG ++V DRV Y YC+ FGVDPG L+C Sbjct: 136 AAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDC 313
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.914e-29 Identity = 76/180 (42.22%), Postives = 93/180 (51.67%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKN-KADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAF A +HETT +C+ EE N A +C P++PCA GK YYGRGPIQ+T N NY AG+AIG D LN+P+ VA D +SFKTA WFWMT H+V+ G+ E ING ECG D+V DR+ Y YC GV G L+C Sbjct: 132 AAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDC 311
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.970e-29 Identity = 73/179 (40.78%), Postives = 93/179 (51.96%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAF A +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+WFWMT H V+ GF ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 125 AAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 303
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 4.970e-29 Identity = 72/178 (40.45%), Postives = 92/178 (51.69%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAF +HETT +C++ E+N + S ++PCA+GK YYGRGPIQ++ N NY + GRAIG D LN+P+ VA D VISFKTALWFWMT H V+ G+ ING ECG +V DR+ Y YC FG+ G L+C Sbjct: 124 AAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDC 301
BLAST of CB305063 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.970e-29 Identity = 71/179 (39.66%), Postives = 97/179 (54.19%), Query Frame = -3 Query: 160 AAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 591 AAFF +HETT +C+ +E+N + +C+ S ++PCA+GK YYGRGP+QL+ N NY + GRAIG D LN+P+ V+ D VI+FK A+WFWMT H+V+ G+ ING ECG +V DR+ Y YC GV+PG L+C Sbjct: 127 AAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDC 305 The following BLAST results are available for this feature:
BLAST of CB305063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305063 ID=CB305063; Name=CB305063; organism=Citrus sinensis; type=EST; length=593bpback to top |