CB305064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22 Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = -3 Query: 243 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 608 D +++ NYYPPCP P+ LG H D +ALT+L+ ++V GL+V D W +P A+VI+IGD LSNG+YK+ LHR V++ + R S FL P D VV P P ++ P + Sbjct: 224 DSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDF 345
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22 Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = -3 Query: 243 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 608 D +++ NYYPPCP P+ LG H D +ALT+L+ ++V GL+V D W +P A+VI+IGD LSNG+YK+ LHR V++ + R S FL P D VV P P ++ P + Sbjct: 224 DSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDF 345
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22 Identity = 49/129 (37.98%), Postives = 80/129 (62.02%), Query Frame = -3 Query: 219 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFL-------EPPADTVVGPLPQLVDDENPPKYKAKKFKDY 584 +YYP CP+P+L G H+D LT+L+ +++ GLQ+ +++WID +IP ALVI+I D +++++N K+K+V HR +K R+S V E + + GP+ +L+ +ENPP YK KD+ Sbjct: 251 HYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDF 379
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22 Identity = 47/126 (37.30%), Postives = 77/126 (61.11%), Query Frame = -3 Query: 216 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEP---PADTVVGPLPQLVDDENPPKYKAKKFKDYS 584 +YYPPCP+PDL LG+ H+D S LT+L+ + + GLQV D W+D +P ALV+++GD +++++N K+ +V HR + R+S F V GP+ +++ +ENPP Y+ +Y+ Sbjct: 221 HYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYA 346
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.272e-22 Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = -3 Query: 213 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSY 611 ++ + ++++N+YPPC PDL LG H D S+LT+L + V GLQVF D++W + P A V++IGD LSNG +K+ LHR V+++ R S FL P D VV P +++ K K +K+ D+++ Sbjct: 219 EENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILE-----KMKTRKYPDFTW 346
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21 Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = -3 Query: 243 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 611 ++ + ++++NYYPPC +PDL LG H D ++LT+L + V GLQVF +++W + P A V++IGD LSN +YK+ LHR V+ + R S FL P D VV P +L+D +Y Sbjct: 221 EENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSITSRRY 343
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.596e-21 Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = -3 Query: 219 LGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 548 LG+ H+D + LT+L+ NEV GL + KD++W+ K I A V++IGD IEI+SNG YK++ HR ++ DK R+S F +P T +GPLP LV EN KYK ++DY Sbjct: 223 LGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLV-KENGVKYKTIDYEDY 332
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = -3 Query: 243 GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 617 G D I +++NYYPPC RP LG H D ++LT+L + V GLQV + RW + +A V++IGD LSNG+YK+ LHR V+ R S FL P D VV P LVD NP Y Sbjct: 199 GNDSI---MRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAY 320
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = -3 Query: 228 KEAAGGDDIE---YMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKF 629 K+A GD + K+++YPPCPR DL G+ AHTD + +L ++ V GLQ+ KD RWID + + +A+VI+ GDQIE+LSNG+YK+ HR + R S F P + P +E P KF Sbjct: 142 KKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEAAPPALYPKF 279
BLAST of CB305064 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 47/125 (37.60%), Postives = 77/125 (61.60%), Query Frame = -3 Query: 219 KINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 590 K++ YP CP+P++ G+ AHTD + +L ++ V GLQ+ KD WID + +++VI++GDQ+E+++NG+YK+++HR K+ RMS F P +D + P L E +Y + F DY Sbjct: 161 KVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKET--EYPSFVFDDY 283 The following BLAST results are available for this feature:
BLAST of CB305064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305064 ID=CB305064; Name=CB305064; organism=Citrus sinensis; type=EST; length=631bpback to top |