CB305068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4) HSP 1 Score: 144.821 bits (364), Expect = 3.588e-34 Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = -2 Query: 293 VLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 616 V D NIT+ E+ + AV L PVS AFEV F Y++G+YSST C TP VNHAV+AVGYG ++G+PYW++KNSWG WG +GYF +E GKNMCG+A CASYP+ Sbjct: 225 VKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 332
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.782e-25 Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = -2 Query: 287 GAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 589 G+E EL++ VG RP +VA +V F Y+SG+Y S C +P+ VNHAV+AVGYG + G YW++KNSWG WG+ GY +M + NMCGIA+ AS P+VA Sbjct: 224 GSEVELKNLVGARRPAAVAVDVESDFMMYRSGIYQSQTC--SPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCGIASLASLPMVA 323
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.499e-24 Identity = 57/121 (47.11%), Postives = 73/121 (60.33%), Query Frame = -2 Query: 290 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 646 +F S +V NI G+E LQ AV + P+SV + F+FY SGVY C +P ++HAV+AVGYG E G +WL+KNSW +WGD GY KM + N CGIAT ASYP+V Sbjct: 205 RFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSC--SPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.861e-23 Identity = 50/113 (44.25%), Postives = 73/113 (64.60%), Query Frame = -2 Query: 293 GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPV 625 GV + VN+T G+E LQ+A+ PV++A + VD FR+Y SGVY++ C N D++H V+A+GYG G Y+L+KNSW NWG GY M N+CG+++ A+YP+ Sbjct: 415 GVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGTYQGQDYFLVKNSWSTNWGMDGYVYMARNDNNLCGVSSQATYPI 527
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.847e-22 Identity = 59/125 (47.20%), Postives = 75/125 (60.00%), Query Frame = -2 Query: 290 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 646 ++ +EN V D V I G E+ L AV V P+SVA + D F+FY SG+Y +C + +NHAV+ VGYG E DG YWL+KNSWGE WG GY K+ N CGIAT A+YP+V Sbjct: 212 RYHAENSAANVRDFVQIP-GREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLATYPIV 333
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.847e-22 Identity = 55/107 (51.40%), Postives = 67/107 (62.62%), Query Frame = -2 Query: 290 VNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 604 V+I G E L AV V PVSVA + F+FY+SG+Y C + D++H V+ VGYG E G YW++KNSWGE WGD GY M KN CGIAT ASYP+V Sbjct: 114 VDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSE--DLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASYPLV 218
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.197e-21 Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = -2 Query: 290 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 646 ++ +EN V D V I G+E+ L AV V P+SVA + G F+FY SG+Y +C + +NHAV+ VGYG E DG +WL+KNSWGE WG GY K+ N CGIAT ++YP+V Sbjct: 212 RYHAENSAANVRDFVQIP-GSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGIATYSTYPIV 333
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.197e-21 Identity = 56/121 (46.28%), Postives = 71/121 (58.68%), Query Frame = -2 Query: 290 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 646 +F + ++G SV + E+ LQ AV V P+SVA + F+FY SGVY C T +D H V+AVGYG E YWL+KNSWG +WGD GY KM + N CGIA+ SYP V Sbjct: 204 RFDANSIGAICTGSVEVQ-HTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLD--HGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 321
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.042e-21 Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = -2 Query: 290 FSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 643 F+ +G V+I G E++++ AV + PVSVA + + F+ Y GVY+ +C +D H V+ VGYG E G+ YWL+KNSWG WG+ GY KM + N CGIAT +SYP V Sbjct: 221 FNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLD--HGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIATASSYPTV 339
BLAST of CB305068 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.667e-21 Identity = 54/120 (45.00%), Postives = 68/120 (56.67%), Query Frame = -2 Query: 290 FSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 643 ++S+N + + G ED L+ AV PVSV + F FYKSGVY C +VNH V+ VGYG DG YWL+KNSWG N+GD GY +M KN CGIA+ SYP + Sbjct: 224 YNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG---NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340 The following BLAST results are available for this feature:
BLAST of CB305068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 159
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB305068 ID=CB305068; Name=CB305068; organism=Citrus sinensis; type=EST; length=647bpback to top |