CB305073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20 Identity = 50/93 (53.76%), Postives = 59/93 (63.44%), Query Frame = -3 Query: 246 AITCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 524 A++CG V+ +LA CI YL G P CC+GV +LN ARTTPDRQ AC CL A + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 26 ALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.737e-20 Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = -3 Query: 249 AITCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 524 A++CG VT+S+APC+ Y+ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.737e-20 Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = -3 Query: 249 AITCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 524 A++CG VT+S+APC+ Y+ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19 Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = -3 Query: 249 PVTNAITCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 536 P + I CG VT++LA C+ YL G P CC GV+SL A+TTPDR+ C CLK A I+G+ ++ A LP+ CGV IPY IS ST+C + Sbjct: 21 PTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = -3 Query: 249 AITCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 524 A+ CGQV + + PC+ Y++ GG P CC+GVR L+ A+++ DRQ CNCLK I + N AA +PS+C V +PY ISP DCSR+ Sbjct: 26 ALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19 Identity = 41/92 (44.57%), Postives = 62/92 (67.39%), Query Frame = -3 Query: 249 AITCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 524 AITC VT +L PC+PYLR+GG+ P P CC+G + L GA RT DR+ AC C K A ++ ++P++A+ LP +CG+ I+P+ +C+ + Sbjct: 26 AITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.990e-18 Identity = 45/92 (48.91%), Postives = 55/92 (59.78%), Query Frame = -3 Query: 249 AITCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 524 AI C QV LA C+PYL+ GG P P CC+G+ SL AA DRQ ACNCLK TI GI + A LP++CGV I S + DC+ + Sbjct: 28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17 Identity = 51/100 (51.00%), Postives = 62/100 (62.00%), Query Frame = -3 Query: 246 PVT-NAI-TCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 536 P+T NA+ +CG V +LA CI YL G CC+GV +L A TTPDRQ AC CL+ A + G+ AAGLPS C V IPYKIS ST+C+ VR Sbjct: 20 PITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.874e-17 Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = -3 Query: 249 AITCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 524 AI CG V + + PC+ Y++ GG P CC GV++L+ AR+ DRQ+ACNCLK I + + A +P +CGV +PY IS + DCSRV Sbjct: 23 AIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CB305073 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.402e-17 Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = -3 Query: 249 NAITCGQVTASLAPCIPYLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 527 +AI+C V L PC+ YL +G PP CC GV+SL A T+ D++AAC C+K ++ +KP +A L S CG +P SP+ DC+ V Sbjct: 24 SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVT-VKPELAQALASNCGASLPVDASPTVDCTTV 115 The following BLAST results are available for this feature:
BLAST of CB305073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305073 ID=CB305073; Name=CB305073; organism=Citrus sinensis; type=EST; length=631bpback to top |