CB305090

Overview
NameCB305090
Unique NameCB305090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2673 contig Csv1_Contig2673:872..1385. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CALL_CAEEL (Calmodulin-like protein OS=Caenorhabditis elegans GN=cal-1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.143e-17
Identity = 39/61 (63.93%), Postives = 52/61 (85.25%), Query Frame = -2
Query:  331 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 513
            ++EAFRVFDKD NG I+A E R+ M ++G + ++EEVDEMI+E DVDGDG+I+YEEFVK+M
Sbjct:   98 IREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMM 158          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CML6_ORYSJ (Putative calmodulin-like protein 6 OS=Oryza sativa subsp. japonica GN=CML6 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.983e-16
Identity = 36/63 (57.14%), Postives = 53/63 (84.13%), Query Frame = -2
Query:  325 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 513
            L++AFR+FDKD NGFIS  EL  VM +LGE++T++E+D+M++ AD + DGQ++YEEF +VMM+
Sbjct:   89 LRKAFRIFDKDDNGFISRNELSMVMASLGEEMTEDEIDDMMKAADSNNDGQVDYEEFKRVMMS 151          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CALM_CANAL (Calmodulin OS=Candida albicans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 5.065e-15
Identity = 35/64 (54.69%), Postives = 54/64 (84.38%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            + EAF+VFD++ +G ISAAELRH++T++GEKL+D +VD+MI+EAD + DG+I+ +EF  ++ AK
Sbjct:   86 IAEAFKVFDRNGDGKISAAELRHLLTSIGEKLSDADVDQMIKEADTNNDGEIDIQEFTSLLAAK 149          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CML14_ARATH (Probable calcium-binding protein CML14 OS=Arabidopsis thaliana GN=CML14 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 33/64 (51.56%), Postives = 49/64 (76.56%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            L++AF+V DK+  GF++ A+LRH++T++GEKL   E DE I+E DV  DG+I YE+F+  M+AK
Sbjct:   85 LRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSEFDEWIKEVDVGSDGKIRYEDFIARMVAK 148          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CML13_ARATH (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 33/64 (51.56%), Postives = 49/64 (76.56%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            L++AF+V DK+  GF++ A+LRH++T++GEKL   E DE I+E DV  DG+I YE+F+  M+AK
Sbjct:   85 LRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNEFDEWIKEVDVGSDGKIRYEDFIARMVAK 148          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CALM_KLULA (Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 37/61 (60.66%), Postives = 50/61 (81.97%), Query Frame = -2
Query:  331 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 513
            L EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD EVDEM+RE   DG G+IN ++F  ++
Sbjct:   86 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CML7_ORYSJ (Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica GN=CML7 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.288e-14
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = -2
Query:  322 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 513
            L++AFRV DKD +G +S A+LRHV+T++GEKL   E DE IRE DV  DG I Y++F++ ++AK
Sbjct:   85 LRDAFRVLDKDASGTVSVADLRHVLTSIGEKLEPHEFDEWIREVDVAPDGTIRYDDFIRRIVAK 148          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: CALM_YEAST (Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 36/61 (59.02%), Postives = 50/61 (81.97%), Query Frame = -2
Query:  331 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 513
            L EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD EVD+M+RE   DG G+IN ++F  ++
Sbjct:   86 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 145          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: MLE_PATYE (Myosin, essential light chain, adductor muscle OS=Patinopecten yessoensis PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14
Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = -2
Query:  325 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 507
            EAF+ FD++  GFIS AELRHV+T LGE+LTDEE+DE+I   D+  D +G + YE+FVK +MA
Sbjct:   88 EAFKTFDREGQGFISGAELRHVLTALGERLTDEEIDEIISLTDLQEDLEGNVKYEDFVKKVMA 150          
BLAST of CB305090 vs. ExPASy Swiss-Prot
Match: MLE_AEQIR (Myosin essential light chain, striated adductor muscle OS=Aequipecten irradians PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.629e-13
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = -2
Query:  325 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 507
            EAF+ FD++  GFIS AELRHV+T LGE+L+DE+VDE+I+  D+  D +G + YE+FVK +MA
Sbjct:   89 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 151          
The following BLAST results are available for this feature:
BLAST of CB305090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
CALL_CAEEL4.143e-1763.93Calmodulin-like protein OS=Caenorhabditis elegans ... [more]
CML6_ORYSJ5.983e-1657.14Putative calmodulin-like protein 6 OS=Oryza sativa... [more]
CALM_CANAL5.065e-1554.69Calmodulin OS=Candida albicans GN=CMD1 PE=3 SV=2[more]
CML14_ARATH3.283e-1451.56Probable calcium-binding protein CML14 OS=Arabidop... [more]
CML13_ARATH3.283e-1451.56Probable calcium-binding protein CML13 OS=Arabidop... [more]
CALM_KLULA3.283e-1460.66Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV... [more]
CML7_ORYSJ4.288e-1454.69Probable calcium-binding protein CML7 OS=Oryza sat... [more]
CALM_YEAST5.600e-1459.02Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=... [more]
MLE_PATYE7.314e-1458.73Myosin, essential light chain, adductor muscle OS=... [more]
MLE_AEQIR1.629e-1357.14Myosin essential light chain, striated adductor mu... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_H10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_H10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305090 ID=CB305090; Name=CB305090; organism=Citrus sinensis; type=EST; length=514bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACATCGCAAGGGTAGAAA
TTAATGAAACACATTAAACAGACAACAACATTCATAGAACAGCAGAACAA
CTAAAATAATAAAAACCGAAAAGTTTTGCGAGTCACAAGACATATTGACG
AGGGAGACAACATTCTTCCTACACCATCAGGCCCATCACCATTAAAAGAC
CATTGCTTCCTTTAGCCTGACCCTCATGACTATCAAATTAAAAATTGTAA
AAGAGAAAACTAGGAATCCCTTTATAATTTAGTCAACCCATTTTATAAGT
ATTGGGGGGTTGGGGTCATTACTTGGCCATCATAACCTTGACAAATTCCT
CATAATTTATCTGGCCATCACCATCAACATCAGCTTCCCTTATCATCTCA
TCAACTTCTTCATCAGTAAGTTTCTCTCCTAGGTTTGTCATCACATGGCG
CAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCGGA
AGGCCTCTTTCAGC
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