CB305105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.417e-21 Identity = 43/93 (46.24%), Postives = 68/93 (73.12%), Query Frame = -1 Query: 360 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 638 A GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ DK+ VS E + A + GI F+ETSAK S NVE+AF + DI ++ Sbjct: 81 AMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL 173
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.417e-21 Identity = 43/93 (46.24%), Postives = 68/93 (73.12%), Query Frame = -1 Query: 360 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 638 A GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ DK+ VS E + A + GI F+ETSAK S NVE+AF + DI ++ Sbjct: 81 AMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL 173
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.417e-21 Identity = 43/93 (46.24%), Postives = 68/93 (73.12%), Query Frame = -1 Query: 360 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 638 A GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ DK+ VS E + A + GI F+ETSAK S NVE+AF + DI ++ Sbjct: 81 AMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKL 173
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 7.534e-21 Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = -1 Query: 273 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 638 A I+VYD+T++ESF K W+ E+ R AS N+ L GNK DL +K+ V ++ A+++AD+ + FMETSAK SMNV + FMA+ + P N+AR V + + CCS Sbjct: 93 AQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCS 214
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.840e-21 Identity = 48/122 (39.34%), Postives = 71/122 (58.20%), Query Frame = -1 Query: 273 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 638 A I+VYD+T++ESF K W+ E+ R AS N+ L GNK DL +K+ V ++ A+++AD+ + FMETSAK SMNV + FMA+ + P N+ R V + ++ CCS Sbjct: 93 AQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSTRGRGVDLTEPTQPTRSQCCS 214
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 9.840e-21 Identity = 50/122 (40.98%), Postives = 78/122 (63.93%), Query Frame = -1 Query: 276 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR-PPTVQIKGQPVNQKASCC 638 AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T ++VV E + A E G+PFMETSAK +NV+ AF A+ ++K R P+ R V+ +G+ V SCC Sbjct: 138 AHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSEPRFRLHDYVKREGRGV----SCC 255
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.285e-20 Identity = 49/122 (40.16%), Postives = 76/122 (62.30%), Query Frame = -1 Query: 276 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 638 A GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSAK ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 82 AMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.678e-20 Identity = 48/122 (39.34%), Postives = 71/122 (58.20%), Query Frame = -1 Query: 273 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 638 A I+VYD+T++ESF K W+ E+ R AS N+ L GNK DL +K+ V ++ A+++AD+ + FMETSAK SMNV + FMA+ + P +N R V + ++ CCS Sbjct: 93 AQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGINCTRGRGVDLTEPTQPTRSQCCS 214
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.678e-20 Identity = 50/122 (40.98%), Postives = 78/122 (63.93%), Query Frame = -1 Query: 276 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR-PPTVQIKGQPVNQKASCC 638 AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T +VV E + A E G+PFMETSA+ +NV+ AF A+ ++K R A P+ R V+ +G+ V SCC Sbjct: 141 AHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPSEPRFRLHDYVKREGRGV----SCC 258
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.192e-20 Identity = 48/120 (40.00%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 279 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASC 638 A GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ K+ V E A+ A E I F ETSAK S+NV++AF ++ DI + + + N+++P + +K C Sbjct: 81 AMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGNSSKPSSTDLKVSDKKNSNKC 200 The following BLAST results are available for this feature:
BLAST of CB305105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 309
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305105 ID=CB305105; Name=CB305105; organism=Citrus sinensis; type=EST; length=638bpback to top |