CB305105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.192e-20 Identity = 49/122 (40.16%), Postives = 76/122 (62.30%), Query Frame = -1 Query: 276 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 638 A GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSAK ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.192e-20 Identity = 49/122 (40.16%), Postives = 76/122 (62.30%), Query Frame = -1 Query: 276 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 638 A GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSAK ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.192e-20 Identity = 49/122 (40.16%), Postives = 76/122 (62.30%), Query Frame = -1 Query: 276 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 638 A GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSAK ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.863e-20 Identity = 49/122 (40.16%), Postives = 76/122 (62.30%), Query Frame = -1 Query: 276 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 638 A GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSAK ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20 Identity = 48/130 (36.92%), Postives = 82/130 (63.08%), Query Frame = -1 Query: 270 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-----KNRMASQPAMNN--ARPPTVQIKGQPVNQKASCCST 638 A G ++VYD+T +++F+NV++WL E+ +A N+ ++ GNK DL + VS E +A A++ G+ F+ETSA +++N+E+AF + +I K +A+Q A +N + T+ + NQ+ SCCST Sbjct: 85 AVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGTTINVADASANQRRSCCST 214
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RABZ_DICDI (Ras-related protein RabZ OS=Dictyostelium discoideum GN=rabZ PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20 Identity = 43/97 (44.33%), Postives = 67/97 (69.07%), Query Frame = -1 Query: 348 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQP 638 A GI++ YD+ +Q++F+NV +WL E+ R A NV L++ NKCDL +K+VV++ AK FAD+ IP +E SAK+S+ VE+AF+ + ++I P Sbjct: 124 ADGIMLFYDIANQKTFDNVGRWLEEVHRLAGPNVPILIIANKCDLNEKRVVNFNNAKKFADDKNIPIIEVSAKESLGVEEAFIKLASEINKTWKPLP 220
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20 Identity = 50/126 (39.68%), Postives = 77/126 (61.11%), Query Frame = -1 Query: 279 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA-----SQPAMNNARP-PTVQIKGQPVNQKASC 638 A G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ D++VVS E + AD +G F E SAKD++NV+Q F + I +M+ + PA+ A+ P + + P +Q +C Sbjct: 95 AMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20 Identity = 50/126 (39.68%), Postives = 77/126 (61.11%), Query Frame = -1 Query: 279 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA-----SQPAMNNARP-PTVQIKGQPVNQKASC 638 A G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ D++VVS E + AD +G F E SAKD++NV+Q F + I +M+ + PA+ A+ P + + P +Q +C Sbjct: 95 AMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20 Identity = 50/126 (39.68%), Postives = 77/126 (61.11%), Query Frame = -1 Query: 279 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA-----SQPAMNNARP-PTVQIKGQPVNQKASC 638 A G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ D++VVS E + AD +G F E SAKD++NV+Q F + I +M+ + PA+ A+ P + + P +Q +C Sbjct: 95 AMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20 Identity = 50/126 (39.68%), Postives = 77/126 (61.11%), Query Frame = -1 Query: 279 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA-----SQPAMNNARP-PTVQIKGQPVNQKASC 638 A G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ D++VVS E + AD +G F E SAKD++NV+Q F + I +M+ + PA+ A+ P + + P +Q +C Sbjct: 95 AMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220 The following BLAST results are available for this feature:
BLAST of CB305105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 309
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305105 ID=CB305105; Name=CB305105; organism=Citrus sinensis; type=EST; length=638bpback to top |