CB305105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19 Identity = 47/124 (37.90%), Postives = 79/124 (63.71%), Query Frame = -1 Query: 279 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASC 638 A G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ D++V+S E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T ++K P + +C Sbjct: 103 AMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNT-RLKETPPPPQPNC 225
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19 Identity = 47/124 (37.90%), Postives = 79/124 (63.71%), Query Frame = -1 Query: 279 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASC 638 A G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ D++V+S E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T ++K P + +C Sbjct: 103 AMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNT-RLKETPPPPQPNC 225
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19 Identity = 49/110 (44.55%), Postives = 75/110 (68.18%), Query Frame = -1 Query: 312 AHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQI 638 AHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK DL + +VVS + AK A++ + ++E SAK NVE+AF + +K+++ P +NA TV + Sbjct: 80 AHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYP--SNAPASTVSL 187
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19 Identity = 42/89 (47.19%), Postives = 64/89 (71.91%), Query Frame = -1 Query: 372 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI 638 A GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E I F ETSAK ++N+E+AF+ + DI Sbjct: 82 AMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDI 170
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19 Identity = 48/124 (38.71%), Postives = 78/124 (62.90%), Query Frame = -1 Query: 276 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQ--PAMNNARPPTVQIK-GQPVNQKASCC 638 A GII+VYDVTD+ +F N+KQW ++ +A++ LLVGNK D+ D +VV+YE +A A E+G+PF+E+SAK+ NV + F + I+ ++ S N+ + + I + + K++CC Sbjct: 93 AMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSDM-DTRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKIDSNKLSGPNSGKDGNISINANKGDSSKSNCC 215
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19 Identity = 47/124 (37.90%), Postives = 78/124 (62.90%), Query Frame = -1 Query: 279 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASC 638 A G I++YD+T++ESFN V+ W +I Y+ +N +L GNKCD+ D++VVS E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T ++K P + +C Sbjct: 103 AMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST-RLKETPPPPQPNC 225
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19 Identity = 47/124 (37.90%), Postives = 78/124 (62.90%), Query Frame = -1 Query: 279 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASC 638 A G I++YD+T++ESFN V+ W +I Y+ +N +L GNKCD+ D++VVS E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T ++K P + +C Sbjct: 103 AMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST-RLKETPPPPQPNC 225
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.052e-19 Identity = 49/110 (44.55%), Postives = 74/110 (67.27%), Query Frame = -1 Query: 312 AHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQI 638 AHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK DL D +VV + AK A++ + ++E SAK NVE+AF + +K+++ P +NA TV + Sbjct: 80 AHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYP--SNAPTSTVNL 187
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.210e-19 Identity = 47/135 (34.81%), Postives = 82/135 (60.74%), Query Frame = -1 Query: 270 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-----KNRMASQPAMNNARPPTVQIK-------GQPVNQKASCCST 638 A G ++VYD+T +++F+++ +WL E+ +A N+ +L+GNK DL D++ V E AK FA + G+ F+ETSA ++ N+E AF+ + +I K +A+ +N P ++ K GQ + +K +CCS+ Sbjct: 88 AVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKKACCSS 222
BLAST of CB305105 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.052e-18 Identity = 47/124 (37.90%), Postives = 77/124 (62.10%), Query Frame = -1 Query: 276 AHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQP--AMNNARPPTVQI-KGQPVNQKASCC 638 A GII+VYDVTD+ +F N+KQW ++ +A++ LLVGNK D+ + +VV+ + +A A E+GIPF+E+SAK+ NV + F + I+ ++ S + N + + I G + K++CC Sbjct: 93 AMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINSGSGNSSKSNCC 215 The following BLAST results are available for this feature:
BLAST of CB305105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 309
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305105 ID=CB305105; Name=CB305105; organism=Citrus sinensis; type=EST; length=638bpback to top |