CB305120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_RUBXD (ATP-dependent Clp protease proteolytic subunit OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=clpP PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.819e-19 Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = -3 Query: 274 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 609 TMQ +K + T +G A + FLLA G KG R A+P +RI L PA G GQA D+ A EL+R + + + LS TGQP++KI +D R G++EA+EYGLID I+R Sbjct: 86 TMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRILLHQPAVGGLAGQASDVEIHARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEAIEYGLIDDIVR 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_NITSB (ATP-dependent Clp protease proteolytic subunit OS=Nitratiruptor sp. (strain SB155-2) GN=clpP PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.819e-19 Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM +K V T C+G A + FLL+ G KG R A+P +RI + P G A+GQA DI +A E+LR++ + + L+ TGQ +KI KD R S+EA EYGLID+++ Sbjct: 81 TMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPLGGAQGQATDIEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEEAKEYGLIDQVL 191
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_HAEDU (ATP-dependent Clp protease proteolytic subunit OS=Haemophilus ducreyi GN=clpP PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.819e-19 Identity = 44/111 (39.64%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM +K V T C G A + FLL+GG+KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQ F K+ D R + EA YGLID+++ Sbjct: 80 TMNFIKPDVATLCTGQACSMGAFLLSGGKKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQTFAKVAADTERDNFMSATEAKNYGLIDKVL 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP4_PROM9 (ATP-dependent Clp protease proteolytic subunit 4 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP4 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.819e-19 Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = -3 Query: 274 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 609 TMQ + V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I +A E+L ++ + L+ TGQP EKI +D R EA+EYGLID++I+ Sbjct: 107 TMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVIK 218
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.819e-19 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI +A E+L +++ + L+ TGQP E+I +D R ++A EYGLID++I Sbjct: 78 TMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.819e-19 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI +A E+L +++ + L+ TGQP E+I +D R ++A EYGLID++I Sbjct: 78 TMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_GLUOX (ATP-dependent Clp protease proteolytic subunit 1 OS=Gluconobacter oxydans GN=clpP1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.819e-19 Identity = 47/111 (42.34%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ ++ PV T C+G A + LLAGGEKG+R A+P +R+ + P+G A+GQA DI +A E+L +R + + TGQ E+I + L R + EA E+GLID+++ Sbjct: 93 TMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHRYALPNARVMVHQPSGGAQGQASDIEIQAREILIIRQRLNEIYREHTGQTLEQIEQKLERDSYLSANEAREFGLIDKVV 203
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SHESM (ATP-dependent Clp protease proteolytic subunit OS=Shewanella sp. (strain MR-4) GN=clpP PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.988e-19 Identity = 48/111 (43.24%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L ++ + LS TGQP E I +D R + +A+EYGL+D ++ Sbjct: 88 TMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHTGQPLELIERDTDRDNFMSATQAVEYGLVDAVM 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SHESA (ATP-dependent Clp protease proteolytic subunit OS=Shewanella sp. (strain ANA-3) GN=clpP PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.988e-19 Identity = 48/111 (43.24%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L ++ + LS TGQP E I +D R + +A+EYGL+D ++ Sbjct: 88 TMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHTGQPLEVIERDTDRDNFMSATQAVEYGLVDAVM 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SHEON (ATP-dependent Clp protease proteolytic subunit OS=Shewanella oneidensis GN=clpP PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.988e-19 Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L +++ + + L+ TGQP E I +D R + +A+EYGL+D ++ Sbjct: 88 TMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATQAVEYGLVDAVM 198 The following BLAST results are available for this feature:
BLAST of CB305120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305120 ID=CB305120; Name=CB305120; organism=Citrus sinensis; type=EST; length=611bpback to top |