CB305120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_GEOBB (ATP-dependent Clp protease proteolytic subunit OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=clpP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19 Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI + P G +GQA DI A E+LR++D + L+ TGQ EK+ D R +EA YG+ID I+ Sbjct: 79 TMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATDIHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIV 189
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTE (ATP-dependent Clp protease proteolytic subunit OS=Clostridium tetani GN=clpP PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19 Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA G KG R A+P S I + P G +GQA DI AD +L+++ + LS KTGQP E I +D R + +A +YGLID ++ Sbjct: 80 TMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGFQGQATDIGIHADRILKIKQNLNSILSEKTGQPLEVIQRDTERDNFMDANQAKDYGLIDEVM 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_ANOFW (ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19 Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA G KG R A+P S I + P G +GQA +I A +L +RD + + LS TGQP E I +D R +++A EYGLIDR++ Sbjct: 80 TMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEYGLIDRVL 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_ACISJ (ATP-dependent Clp protease proteolytic subunit OS=Acidovorax sp. (strain JS42) GN=clpP PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19 Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C GFA + FLLA G KG R ++P S+I + G ARGQA DI A ++LR ++ + + L+ +TGQP EK+ D R + EA +YG++D++I Sbjct: 88 TMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKEQMNRILAERTGQPIEKVKADTERDYFMTADEAKDYGIVDQVI 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19 Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ + V T C G A + FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + L+ TGQP +KI++D R EA+EYGLIDR++ Sbjct: 85 TMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_BURXL (ATP-dependent Clp protease proteolytic subunit 2 OS=Burkholderia xenovorans (strain LB400) GN=clpP2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19 Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = -3 Query: 280 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 609 TMQ +K V T C+G A + FLLA G KG R A+P SR+ + P G ARGQA DI +A E+L +++ + L+ TGQP E+I +D R +A YGL+D++ Sbjct: 103 TMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQV 212
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_WIGBR (ATP-dependent Clp protease proteolytic subunit OS=Wigglesworthia glossinidia brevipalpis GN=clpP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19 Identity = 47/111 (42.34%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G + +A +LA GEKG R ++P +RI + P G ++GQA DI E+L+++ + + LS+ TGQ E I+KD R + F EA+ YGLID++I Sbjct: 80 TMQFIKCEVSTLCIGQSSSMAALILASGEKGKRFSLPNARIMIHQPLGGSQGQATDIAIHTTEILKIKKCMIELLSKHTGQSAEIISKDTERDRFFSGSEAVIYGLIDKVI 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SULNB (ATP-dependent Clp protease proteolytic subunit OS=Sulfurovum sp. (strain NBC37-1) GN=clpP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19 Identity = 45/111 (40.54%), Postives = 73/111 (65.77%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM +K + T C+G A + FLLA G KG R A+P +RI + P+G A+GQ+ DI+ +A E+ R++D + + ++ KTG+ ++I KD R ++EA+EYGLID+++ Sbjct: 80 TMNYIKPDIVTICIGQAASMGAFLLASGTKGKRYALPHARIMIHQPSGGAQGQSTDIQIQAQEIQRLKDTLNEIMAEKTGKTAKRIEKDTERDNFMSAKEAVEYGLIDKVL 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSM (ATP-dependent Clp protease proteolytic subunit OS=Geobacter sp. (strain M21) GN=clpP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19 Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI + P G +GQA DI A E+LR++D + L+ TGQ EK+ D R +EA YG+ID I+ Sbjct: 79 TMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATDIHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIV 189
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CLOPS (ATP-dependent Clp protease proteolytic subunit OS=Clostridium perfringens (strain SM101 / Type A) GN=clpP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLL+ G KG R A+P + I + P G +GQA DI A +L+++D + + LS T QP EKI D+ R + EA+EYGLID++I Sbjct: 81 TMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIMIHQPLGGFQGQATDIDIHAKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAVEYGLIDKVI 191 The following BLAST results are available for this feature:
BLAST of CB305120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305120 ID=CB305120; Name=CB305120; organism=Citrus sinensis; type=EST; length=611bpback to top |