CB305120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CLOPE (ATP-dependent Clp protease proteolytic subunit OS=Clostridium perfringens GN=clpP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLL+ G KG R A+P + I + P G +GQA DI A +L+++D + + LS T QP EKI D+ R + EA+EYGLID++I Sbjct: 81 TMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIMIHQPLGGFQGQATDIDIHAKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAVEYGLIDKVI 191
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CLOP1 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=clpP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLL+ G KG R A+P + I + P G +GQA DI A +L+++D + + LS T QP EKI D+ R + EA+EYGLID++I Sbjct: 81 TMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIMIHQPLGGFQGQATDIDIHAKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAVEYGLIDKVI 191
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_BACSK (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus clausii (strain KSM-K16) GN=clpP2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19 Identity = 43/114 (37.72%), Postives = 70/114 (61.40%), Query Frame = -3 Query: 268 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 609 TMQ +K V T C+G A + FLL G KG R A+P S + + P G +GQA D+ A ++++R+ + + ++ ++GQP+E+I +D R +++A EYGLID++I P Sbjct: 80 TMQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMALPNSEVMIHQPLGGMQGQAADMEIHARRIIQMREKLNQIMAERSGQPYERIARDTDRDNFMTAEQAKEYGLIDKVIETP 193
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ + V T C G A + FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + ++ TGQP +KI++D R EA+EYGLIDR++ Sbjct: 85 TMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SHESW (ATP-dependent Clp protease proteolytic subunit OS=Shewanella sp. (strain W3-18-1) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18 Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L ++ + L+ TGQP E I +D R + +A+EYGL+D ++ Sbjct: 88 TMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLAEHTGQPLEVIERDTDRDNFMSATQAVEYGLVDSVM 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SHEPC (ATP-dependent Clp protease proteolytic subunit OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18 Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L ++ + L+ TGQP E I +D R + +A+EYGL+D ++ Sbjct: 88 TMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLAEHTGQPLEVIERDTDRDNFMSATQAVEYGLVDSVM 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SHELP (ATP-dependent Clp protease proteolytic subunit OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18 Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLAGG KG R +P SR+ + P G +GQA DI A E+L +++ + + L+ TGQP E I +D R + EA EYGL+D ++ Sbjct: 89 TMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATEAAEYGLVDSVL 199
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_GEOUR (ATP-dependent Clp protease proteolytic subunit OS=Geobacter uraniireducens (strain Rf4) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18 Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI + P G +GQA DI A E+LR++ + + ++ TGQP EK+ D R ++A YG+ID II Sbjct: 79 TMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLTNSRIMIHQPLGGFQGQATDIHIHAQEILRMKKKLNELMAEHTGQPVEKLEADTERDYFMSGEDAKNYGIIDSII 189
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_EUBE2 (ATP-dependent Clp protease proteolytic subunit OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18 Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLL+GG KG R A+P + I + P+G ARGQ +IR A+ +L+ R+ + + L+ TG+ E+I++D R +QEA+ YGLID ++ Sbjct: 80 TMQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEIMIHQPSGGARGQETEIRIVAENILKTRNKLNEILAANTGKSVEEISRDTERDNYMTAQEAVAYGLIDSVV 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CAMHC (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=clpP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18 Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM +K V T C+G A + FLL+ GEKG R A+P +RI + P G A+GQA DI E+LR++ + K L+ +GQ KI KD R +QEA++YGLID+++ Sbjct: 79 TMNYIKPAVSTICIGQAASMGAFLLSCGEKGKRYALPNARIMIHQPLGGAQGQATDIEITTKEILRIKATLNKILAENSGQKLSKIEKDTDRDFYMSAQEAVKYGLIDKVL 189 The following BLAST results are available for this feature:
BLAST of CB305120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305120 ID=CB305120; Name=CB305120; organism=Citrus sinensis; type=EST; length=611bpback to top |