CB305120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMP (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.081e-21 Identity = 54/117 (46.15%), Postives = 72/117 (61.54%), Query Frame = -3 Query: 259 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 609 TMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + ELS +TG+ E I D R QEA+EYGLID ++ +K Sbjct: 78 TMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQASDIRIQADEILYLKERLNTELSERTGKELETIKGDTDRDFYMSPQEAVEYGLIDLVLDKKPVK 194
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_PROM9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.081e-21 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = -3 Query: 259 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 609 TMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + ELS +TG+ +E I +D R EA+EYGLID ++ +K Sbjct: 78 TMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGKDYETIKEDTDRDFYMSPSEAVEYGLIDLVLDKKPVK 194
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_VARPS (ATP-dependent Clp protease proteolytic subunit OS=Variovorax paradoxus (strain S110) GN=clpP PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.329e-21 Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+GFA + FLLA GEKG R ++P S+I + G ARGQA DI A ++LR +D + + L+ +TGQP EK+ D R + EA +YGL+D++I Sbjct: 88 TMQFIKPDVSTMCIGFAASMGAFLLAAGEKGKRFSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKSDTERDYFLTADEAKDYGLVDQVI 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CHLCH (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium chlorochromatii (strain CaD3) GN=clpP PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.329e-21 Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = -3 Query: 253 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII--RPPRIKED 609 TMQ ++ + T CVG A + FLLA G KG R+++P SRI + P+G A+GQ DI +A E+ ++R + + L++ TGQP EK+ +D R + QEALEYGLID I RP K+D Sbjct: 105 TMQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLPHSRIMIHQPSGGAQGQETDIVIQAREIEKIRRLLEELLAKHTGQPVEKVREDSERDRWMNPQEALEYGLIDAIFEKRPTPEKKD 225
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_BACA2 (ATP-dependent Clp protease proteolytic subunit OS=Bacillus amyloliquefaciens (strain FZB42) GN=clpP PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.960e-21 Identity = 51/111 (45.95%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA GEKG R A+P S + + P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R + EALEYGLID+++ Sbjct: 80 TMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEALEYGLIDKVL 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.960e-21 Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +KSPV T C+G A + FLL G KG R A+P SRI + P G R QA DI EA E+LR++ + + ++ +TGQP EKI KD R ++EA EYGLID++I Sbjct: 83 TMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMSAEEAREYGLIDQVI 194
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.960e-21 Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +KSPV T C+G A + FLL G KG R A+P SRI + P G R QA DI EA E+LR++ + + ++ +TGQP EKI KD R ++EA EYGLID++I Sbjct: 83 TMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMSAEEAREYGLIDQVI 194
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNS9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9902) GN=clpP1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.960e-21 Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T CVG A + FLL G KG RS++ SRI + P G A GQA DIR +ADE+L ++D + ELS +TGQP ++I +D R EA+ YGLID +I Sbjct: 78 TMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGASGQASDIRIQADEILYLKDRLNTELSDRTGQPLDRIQEDTDRDFFMSPGEAVSYGLIDSVI 188
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_THET8 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpP PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.090e-21 Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +++PV T +G A +A +LA GEKG R A+P +++ + P G RG A DI +A E+L+ + + + L++ TGQP EK+ KD R +QEALEYGLID+++ Sbjct: 79 TMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVV 189
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_THET2 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpP PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 9.090e-21 Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +++PV T +G A +A +LA GEKG R A+P +++ + P G RG A DI +A E+L+ + + + L++ TGQP EK+ KD R +QEALEYGLID+++ Sbjct: 79 TMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVV 189 The following BLAST results are available for this feature:
BLAST of CB305120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305120 ID=CB305120; Name=CB305120; organism=Citrus sinensis; type=EST; length=611bpback to top |