CB305120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CLOK5 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=clpP PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20 Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = -3 Query: 280 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 609 TMQ +KS V T C+G A + FLLA GEKG R A+P S I + P G +GQA DI AD +LR++ + +S +TGQ EK+ KD R ++EA EYGLID + Sbjct: 80 TMQYIKSDVSTICIGMAASMGAFLLAAGEKGKRFALPNSEIMIHQPLGGFQGQATDIGIHADRILRIKKKLNAIISERTGQSIEKVEKDTERDNFMTAEEAKEYGLIDEV 189
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CLOK1 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium kluyveri (strain NBRC 12016) GN=clpP PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20 Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = -3 Query: 280 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 609 TMQ +KS V T C+G A + FLLA GEKG R A+P S I + P G +GQA DI AD +LR++ + +S +TGQ EK+ KD R ++EA EYGLID + Sbjct: 80 TMQYIKSDVSTICIGMAASMGAFLLAAGEKGKRFALPNSEIMIHQPLGGFQGQATDIGIHADRILRIKKKLNAIISERTGQSIEKVEKDTERDNFMTAEEAKEYGLIDEV 189
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_ALKMQ (ATP-dependent Clp protease proteolytic subunit OS=Alkaliphilus metalliredigens (strain QYMF) GN=clpP PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20 Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM +K V T CVG A + FLLA G KG R A+P + + + P G RGQA+DIR A+ ++++RD + K L +TGQP E++ KD R ++EA EYG+ID +I Sbjct: 80 TMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGTRGQAEDIRIHAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEAKEYGIIDEVI 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNPX (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain WH8102) GN=clpP3 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20 Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = -3 Query: 268 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 609 T+Q +KS V T CVG A + FLLA G KG R A+P SRI + P G +R QA DI EA E+LR+++ + + LS +GQ F+KI KD R ++EA +YGLIDR+I P Sbjct: 83 TIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFDKIEKDTDRDYFLSAEEAKDYGLIDRVISHP 197
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNSC (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9605) GN=clpP2 PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20 Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T CVG A + FLL G KG RS++ SRI + P G A+GQA DIR +ADE+L +++ + KELS +TGQ ++I +D R EA+ YGLID +I Sbjct: 78 TMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGAQGQASDIRIQADEILFLKERLNKELSDRTGQTLDRIQQDTDRDFFMSPTEAMNYGLIDSVI 188
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_THELT (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=clpP PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.025e-20 Identity = 54/115 (46.96%), Postives = 69/115 (60.00%), Query Frame = -3 Query: 265 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 609 TMQ +KS V T CVG A +A LLA G KG R A+P +RI L P G A G D+ ELLR+++ I LS KTGQP ++I KD R + EAL+YGL+D++I R Sbjct: 84 TMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEGPVKDVEIITKELLRIKNLINTILSEKTGQPLDRIEKDTDRDFFMSAYEALDYGLVDKVIESKR 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.025e-20 Identity = 48/112 (42.86%), Postives = 73/112 (65.18%), Query Frame = -3 Query: 274 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 609 TMQ +++ V T CVG A + FLL G KG R+++P SRI + P G A+GQA DI +A E+L +D + + LS +TGQP E+I +D R +++A +YGLID++++ Sbjct: 82 TMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGIQAKEILYTKDRLNQILSERTGQPLERIERDTDRDFFMSAEDAKQYGLIDQVVQ 193
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.645e-20 Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = -3 Query: 265 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 609 T+Q ++ V T CVG A + FLLA G+KG R A+P + I + PAG +GQA DI A ++ +++ + K L+ +TGQP E+I KD R +QEA EYG+ID +I P+ Sbjct: 81 TLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYGIIDEVISHPK 195
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_PSYCK (ATP-dependent Clp protease proteolytic subunit OS=Psychrobacter cryohalolentis (strain K5) GN=clpP PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.645e-20 Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM +K V T C+G AY + FLLA GEKG R A+ +R+ + P+G A+GQA DI A E+L+ R + + L+ +TGQP +KI KD+ R ++EA EYGLID ++ Sbjct: 98 TMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYALANARVMIHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQPVDKIEKDVERDYWLDAKEAKEYGLIDEVL 208
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_BACP2 (ATP-dependent Clp protease proteolytic subunit OS=Bacillus pumilus (strain SAFR-032) GN=clpP PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.454e-20 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA GEKG R A+P S + + P G A+GQA +I A +L +RD + + L+ +TGQP E I +D R ++EAL+YGLID+++ Sbjct: 80 TMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQPIEVIERDTDRDNFKTAEEALQYGLIDKVL 190 The following BLAST results are available for this feature:
BLAST of CB305120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB305120 ID=CB305120; Name=CB305120; organism=Citrus sinensis; type=EST; length=611bpback to top |