CB305120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_GEOKA (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus kaustophilus GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20 Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA G KG R A+P S I + P G A+GQA +I A +L +RD + + LS TGQP E I +D R +Q+A+EYG+IDR++ Sbjct: 80 TMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEYGIIDRVL 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_DESRM (ATP-dependent Clp protease proteolytic subunit OS=Desulfotomaculum reducens (strain MI-1) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20 Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA G G R A+P++RI + P G +GQA DI A E+LR++D + L+ TGQP E+IT+D R ++EA +YGLID ++ Sbjct: 81 TMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQPLGGVQGQATDIDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEEAKKYGLIDEVM 191
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_BORPD (ATP-dependent Clp protease proteolytic subunit OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20 Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C G A + FLLA G+KG R +P SRI + P+G A+GQA DI+ +A E+L +R+ + + L+ TGQP E+I D R +++A+ YGL+D+++ Sbjct: 101 TMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQAREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVL 211
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_AZOSE (ATP-dependent Clp protease proteolytic subunit OS=Azoarcus sp. (strain EbN1) GN=clpP PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20 Identity = 47/111 (42.34%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA GEKG R +P SR+ + P G +GQA DI A E+L +R + + L++ TGQP E+I KD R + + +A+EYG++D+++ Sbjct: 96 TMQFIKPSVSTLCIGQAASMGSFLLAAGEKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAREILGIRAKLNEMLAKHTGQPIEQIEKDTDRDRFMSAADAVEYGIVDKVL 206
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMM (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP3 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20 Identity = 51/111 (45.95%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T CVG A + FLL G G RS++ SRI + P G ARGQA DIR +ADE+L ++D + + L+ +TGQP E+I +D R EA+ YGL+D +I Sbjct: 78 TMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKDRLNRVLADRTGQPLERIQEDTDRDFFMSPAEAVGYGLVDSVI 188
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_EUBR3 (ATP-dependent Clp protease proteolytic subunit OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=clpP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLAGG KG R A+P + I + P+G A+GQA +I+ A+ +L+ + + + L+ TG+P+E I D R +QEA EYGLID +I Sbjct: 80 TMQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEIMIHQPSGGAKGQATEIQIAAENILKTKKRLNEILAANTGKPYETIAADTERDNYMSAQEAAEYGLIDSVI 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20 Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + LLA G KG R ++P SRI + P G A+GQA DI+ +A+E+LR+++ + LS+ TGQ F+KI++D R +A EYGL+D ++ Sbjct: 80 TMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVDHVV 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CHLVU (ATP-dependent Clp protease proteolytic subunit OS=Chlorella vulgaris GN=clpP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20 Identity = 44/109 (40.37%), Postives = 74/109 (67.89%), Query Frame = -3 Query: 280 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 606 M +KS V T CVG A +A F+LAGG++G R A+P SRI + P G ++GQA ++ +E+ E++R+R + + S +TGQ ++++D+ R + ++EA EYGL+D++ Sbjct: 84 MNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPHSRIMVHQPEGGSQGQASEVLSESQEVMRIRRQVGRIYSERTGQTLSRVSRDMDRDQFLSAREAKEYGLVDQV 192
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMP (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP2 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20 Identity = 54/115 (46.96%), Postives = 70/115 (60.87%), Query Frame = -3 Query: 268 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 609 T++ +KS V T CVG A + FLL G KG R A+P SRI + P G ++ QA DI EA E+LR++D + +S TGQ FEKI KD R ++EA YGLIDR+I P Sbjct: 83 TIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPHSRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNHSMSDMTGQSFEKIEKDTDRDYFLSAEEAKNYGLIDRVISHP 197
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_BACLD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=clpP1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20 Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C G A + FLLA GEKG R A+P S + + P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EA EYGLID+++ Sbjct: 80 TMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNKILAERTGQPLEVIERDTDRDNFKTAEEAKEYGLIDKVL 190 The following BLAST results are available for this feature:
BLAST of CB305120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305120 ID=CB305120; Name=CB305120; organism=Citrus sinensis; type=EST; length=611bpback to top |