CB305120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.005e-19 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +KS + T C+G A + FLLA G KG R ++P SRI + P G A+GQA DI +A E+LR++D + + L+ TG+P E+I D R +EA YG++D +I Sbjct: 80 TMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAYGIVDHVI 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CYAP8 (ATP-dependent Clp protease proteolytic subunit OS=Cyanothece sp. (strain PCC 8801) GN=clpP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.005e-19 Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +KS V T CVG A + FLLA G G R A+P +RI + P G R QA DI+ EA+E+LR+R + + L+ KTGQ EKI KD R ++EA YGLID++I Sbjct: 83 TMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPHARIMIHQPMGGTGRRQATDIQIEANEILRIRQQLNEILAHKTGQTIEKIQKDTDRDYYMSAEEAQAYGLIDKVI 194
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CLONN (ATP-dependent Clp protease proteolytic subunit OS=Clostridium novyi (strain NT) GN=clpP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.005e-19 Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLL G KG R A+P S I + P G +GQA DI A+ +L+++D + LS +TGQP E I KD+ R ++EA EYGLID +I Sbjct: 80 TMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQGQATDIGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEAKEYGLIDDVI 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_CALS8 (ATP-dependent Clp protease proteolytic subunit OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=clpP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.005e-19 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 T+Q +K V T CVG A + FLLA G KG R A+P S I + P G RGQA DI+ A+ +L+++ I + L+ +TGQP E I +D R ++EAL+YG+ID++I Sbjct: 81 TIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGVRGQATDIKIHAEWILKIKQRINRILAERTGQPIEVIERDTERDFFMTAEEALKYGIIDKVI 191
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_ALKOO (ATP-dependent Clp protease proteolytic subunit OS=Alkaliphilus oremlandii (strain OhILAs) GN=clpP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.005e-19 Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM +K V T C+G A + FLL G+KG R A+P + I + P G RGQA+DIR + +L++R+ + K ++ +TGQP EK+ KD R ++EA YG+ID +I Sbjct: 80 TMNYIKPDVSTICIGMAASMGAFLLTAGQKGKRFALPNAEIMIHQPLGGTRGQAEDIRIHTERILKMRETLNKIIAERTGQPLEKVQKDTDRDFFMEAEEARAYGIIDEVI 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMM (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.005e-19 Identity = 54/115 (46.96%), Postives = 69/115 (60.00%), Query Frame = -3 Query: 268 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 609 TM+ +KS V T CVG A + FLL G KG R A+P SRI + P G + QA DI EA E+LR++D + ++ TGQ FEKI KD R + EA +YGLIDR+I P Sbjct: 83 TMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQPLGGTNQRQASDIEIEAREILRIKDMLNHSMAELTGQSFEKIEKDTDRDYFLSAAEAKDYGLIDRVIAHP 197
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_BACHD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus halodurans GN=clpP1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.005e-19 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA G KG R A+P S + + P G RGQA DI +L +R+ + + L+ +TGQP E+I KD R +++A EYGLID++I Sbjct: 80 TMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGTRGQASDIEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREYGLIDKVI 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_THEPX (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter sp. (strain X514) GN=clpP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T CVG A +A FLLA G KG R A+P S I + P G +GQA DI+ A+ +L++RD + K L+ TGQP EKI D R +++A YG+ID ++ Sbjct: 80 TMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGMQGQATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDAKAYGIIDEVL 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_THEP3 (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=clpP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T CVG A +A FLLA G KG R A+P S I + P G +GQA DI+ A+ +L++RD + K L+ TGQP EKI D R +++A YG+ID ++ Sbjct: 80 TMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGMQGQATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDAKAYGIIDEVL 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SHEAM (ATP-dependent Clp protease proteolytic subunit OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L ++ + + LS TGQP E I +D R + +A+EYGLID ++ Sbjct: 89 TMQFIKPKVSTVCIGQACSMGAFLLAGGEKGMRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNQMLSHHTGQPMEVIERDTDRDNFMSATQAVEYGLIDSVL 199 The following BLAST results are available for this feature:
BLAST of CB305120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305120 ID=CB305120; Name=CB305120; organism=Citrus sinensis; type=EST; length=611bpback to top |