CB305120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_MANSM (ATP-dependent Clp protease proteolytic subunit OS=Mannheimia succiniciproducens (strain MBEL55E) GN=clpP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T CVG A + FLLAGG G R+A+P +R+ + P G RGQA DI+ A E+L+++ + + L+ TGQPFE I +D R +++A YGLID ++ Sbjct: 80 TMQFIKPDVRTLCVGQACSMGAFLLAGGAAGKRAALPHARVMIHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQPFEVIERDTDRDNFMSAEDAKNYGLIDSVL 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_LEPCP (ATP-dependent Clp protease proteolytic subunit OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=clpP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA G KG R ++P S+I + P G A+GQA DI A E+L+ R+ + + L+ +TGQ EKI D R S+EA YGLID++I Sbjct: 88 TMQFIKPQVSTLCMGLAASMGAFLLAAGAKGKRFSLPNSKIMIHQPLGGAQGQATDIEIHAREILKTREQLNRILAERTGQSLEKIQNDTERDYFMSSEEAQTYGLIDQVI 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_FRAP2 (ATP-dependent Clp protease proteolytic subunit OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=clpP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 50/111 (45.05%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + LLAGG KG R ++P S+I + P G RGQA DI A +LR++D + K L+ TGQ E I +D R + EA EYGLID +I Sbjct: 83 TMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVRDTDRDNFMMADEAKEYGLIDHVI 193
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP2_METCA (ATP-dependent Clp protease proteolytic subunit 2 OS=Methylococcus capsulatus GN=clpP2 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 52/111 (46.85%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T CVG A + LLAGG G R +P SRI + P G +GQA DI A E+L VRD + K L+ TGQP EKI D R G +A+ YGLID+++ Sbjct: 77 TMQFIKPDVSTLCVGQAASMGALLLAGGAAGKRYCLPHSRIMIHQPLGGFQGQASDIDIHAREILAVRDRLNKILAHHTGQPIEKIQIDTDRDNFMGGDDAVSYGLIDKVL 187
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_SYNAS (ATP-dependent Clp protease proteolytic subunit OS=Syntrophus aciditrophicus (strain SB) GN=clpP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19 Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM+ +K PV T CVG A + LLA GE+G RSA+P SRI + P G +GQA DI +A E+LR++D + L+ T QP ++I D R SQ+A EYG+ID II Sbjct: 80 TMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRILIHQPLGGFQGQATDIDIQAREILRLKDELSLILADLTNQPLDRIKTDTERDYYMTSQQAKEYGIIDEII 190
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_STAHJ (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -3 Query: 271 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 609 T+Q +K V T C+G A + FLLA G KG R A+P + + + P G A+GQA +I A+ +L+ R+ + K L+ +TGQ EKI KD R + EA EYGLID +++P Sbjct: 80 TIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAKEYGLIDNVMQP 192
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19 Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = -3 Query: 241 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKEDMPRK 609 TMQ ++ V T CVG A + FLLA G KG R A+P S I + P G +GQA DI A +L +RD + + LS TG+P E+I +D R ++EA EYGLID +I K ++P K Sbjct: 81 TMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYGLIDEVI----TKRELPAK 199
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_DECAR (ATP-dependent Clp protease proteolytic subunit OS=Dechloromonas aromatica (strain RCB) GN=clpP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLL G KG R A+P SR+ + P G +GQA DI A E+L +RD + + ++ +GQP E+I KD R + EA EYGLID+++ Sbjct: 93 TMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPLGGFQGQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSAAEAAEYGLIDKVL 203
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_BORA1 (ATP-dependent Clp protease proteolytic subunit OS=Bordetella avium (strain 197N) GN=clpP PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19 Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C G A + FLLA G+KG R ++P SRI + P+G A+GQA DI+ +A E+L +R+ + + L+ TGQ E+I D R +++AL YGL+D+++ Sbjct: 85 TMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFSLPNSRIMIHQPSGGAQGQASDIQIQAKEILDLRERLNRILAENTGQSMERIAIDTERDTFMSAEDALSYGLVDKVL 195
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMA (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus GN=clpP3 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19 Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ + + T C G A + FLLAGG KG R A+P SRI + P G A+GQA +I +A E+L +++ + L+ TGQ EKI++D R QEA+EYGLID+++ Sbjct: 102 TMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHTGQSLEKISEDTDRDHFLSPQEAVEYGLIDKVV 212 The following BLAST results are available for this feature:
BLAST of CB305120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305120 ID=CB305120; Name=CB305120; organism=Citrus sinensis; type=EST; length=611bpback to top |