CB305120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_PSYA2 (ATP-dependent Clp protease proteolytic subunit OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=clpP PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM +K V T C+G AY + FLLA G+KG R A+ +R+ + P+G A+GQA DI A E+L+ R + + L+ +TGQ EKI KD+ R ++EA EYGLID ++ Sbjct: 108 TMNFIKPEVSTICMGGAYSMGSFLLAAGQKGKRYALANARVMIHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQSVEKIEKDVERDYWLDAKEAKEYGLIDEVL 218
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_MACCJ (ATP-dependent Clp protease proteolytic subunit OS=Macrococcus caseolyticus (strain JCSC5402) GN=clpP PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19 Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = -3 Query: 271 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 609 TMQ +K V T C+G A + FLLA G KG R A+P + + + P G A+GQA +I A +L+ R+ + + L+ +TGQP EKI KD R + EA YGLID ++ P Sbjct: 80 TMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEAKAYGLIDEVMHP 192
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_DIAST (ATP-dependent Clp protease proteolytic subunit OS=Diaphorobacter sp. (strain TPSY) GN=clpP PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19 Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C GFA + FLLA G KG R ++P S+I + G ARGQA DI A ++LR +D + + L+ +TGQP EK+ D R + EA +YG++D++I Sbjct: 88 TMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPIEKVKADTERDYFMTADEAKDYGIVDQVI 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_BURS3 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp. (strain 383) GN=clpP PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TMQ +K V T C+G A + FLLA G KG R A+P SR+ + P G ARGQA DI +A E+L +++ + + L++ TGQ E+I +D R S++A YGLID+++ Sbjct: 103 TMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVL 213
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNP6 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM ++ V T CVG A + FLLA G KG R+++ SRI + P G A+GQA DI +A+E+L ++ + + L+ +TGQP +I D R + EA+EYGLIDR+I Sbjct: 78 TMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMIHQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVEYGLIDRVI 188
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNE7 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM ++ V T CVG A + FLLA G KG R+++ SRI + P G A+GQA DI +A+E+L ++ + + L+ +TGQP +I D R + EA+EYGLIDR+I Sbjct: 78 TMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMIHQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVEYGLIDRVI 188
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_VEREI (ATP-dependent Clp protease proteolytic subunit OS=Verminephrobacter eiseniae (strain EF01-2) GN=clpP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19 Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 277 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 609 TM +K V T C G A + FLLA G KG R A+P S++ + P G +GQA +I A E+L+ R+ + K L+ +TGQP EKI +D R + E+ EYGL+D++I Sbjct: 88 TMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFALPNSKVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFLSADESREYGLVDQVI 198
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_STAAW (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MW2) GN=clpP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -3 Query: 271 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 609 T+Q +K V T C+G A + FLLA G KG R A+P + + + P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA EYGLID ++ P Sbjct: 80 TIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP 192
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_STAAT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=clpP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -3 Query: 271 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 609 T+Q +K V T C+G A + FLLA G KG R A+P + + + P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA EYGLID ++ P Sbjct: 80 TIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP 192
BLAST of CB305120 vs. ExPASy Swiss-Prot
Match: CLPP_STAAS (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MSSA476) GN=clpP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -3 Query: 271 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 609 T+Q +K V T C+G A + FLLA G KG R A+P + + + P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA EYGLID ++ P Sbjct: 80 TIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP 192 The following BLAST results are available for this feature:
BLAST of CB305120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305120 ID=CB305120; Name=CB305120; organism=Citrus sinensis; type=EST; length=611bpback to top |