CB305122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_BOVIN (60S ribosomal protein L37 OS=Bos taurus GN=RPL37 PE=3 SV=4) HSP 1 Score: 129.028 bits (323), Expect = 1.476e-29 Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = -2 Query: 300 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREGT 545 M KGT SFGKRRNKTHTLC RCG +++HLQKS C C YPA RKR YNWS KA RR T GTGRMR+L+ V RRF+ GFREGT Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGT 82
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_ICTPU (60S ribosomal protein L37 OS=Ictalurus punctatus GN=rpl37 PE=3 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 1.928e-29 Identity = 58/82 (70.73%), Postives = 66/82 (80.49%), Query Frame = -2 Query: 300 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREGT 545 M KGT SFGKRRNKTHTLC RCG +++HLQKS C C YPA RKR YNWS KA RR T GTGRMR+++ V RRF++GFREGT Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRSTTGTGRMRHMKVVFRRFRNGFREGT 82
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_EMENI (60S ribosomal protein L37 OS=Emericella nidulans GN=rpl37 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.632e-28 Identity = 58/82 (70.73%), Postives = 65/82 (79.27%), Query Frame = -2 Query: 300 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREGT 545 M KGT SFGKR NKTHTLC RCGRRS+H+QKS CA C YPAA+ R YNWS KA RRKT G+GR +LR V RRFK+GF+ GT Sbjct: 1 MTKGTSSFGKRHNKTHTLCRRCGRRSYHIQKSTCANCGYPAAKTRKYNWSEKAKRRKTTGSGRTAHLRDVHRRFKNGFQVGT 82
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_DEBHA (60S ribosomal protein L37 OS=Debaryomyces hansenii GN=RPL37 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.058e-27 Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = -2 Query: 303 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREG 545 M KGT S GKR NK+H LC RCG+RSFH+QK CA+C YPAA+ R++NW+ KA RR+T GTGRM YL+HV RRFK+GF+ G Sbjct: 1 MSKGTPSLGKRHNKSHVLCNRCGKRSFHVQKKTCASCGYPAAKLRSHNWATKAKRRRTTGTGRMAYLKHVSRRFKNGFQTG 81
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37B_SCHPO (60S ribosomal protein L37-B OS=Schizosaccharomyces pombe GN=rpl37b PE=1 SV=4) HSP 1 Score: 122.479 bits (306), Expect = 1.381e-27 Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = -2 Query: 303 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREG 545 M KGT SFG R NK+HT+C RCG+RSFH+QKS CA C YPAA+ R+YNW KA RR+T GTGRM YL+ V R FK+GFR G Sbjct: 1 MTKGTQSFGMRHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTGTGRMSYLKKVHRSFKNGFRSG 81
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_CANAL (60S ribosomal protein L37 (Fragment) OS=Candida albicans GN=RPL37 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.804e-27 Identity = 52/79 (65.82%), Postives = 66/79 (83.54%), Query Frame = -2 Query: 303 KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREG 539 +GT S GKR NK+HTLC RCGRRSFH+QK C++C YPAA+ R++NW++KA RR+T GTGRM YL+HV RRFK+GF+ G Sbjct: 1 EGTPSLGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPAAKMRSHNWALKAKRRRTTGTGRMAYLKHVTRRFKNGFQTG 79
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37A_SCHPO (60S ribosomal protein L37-A OS=Schizosaccharomyces pombe GN=rpl37a PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.804e-27 Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = -2 Query: 303 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREG 545 M KGT SFG R NK+HT+C RCG+RSFH+QKS CA C YPAA+ R+YNW KA RR+T GTGRM YL+ V R FK+GFR G Sbjct: 1 MTKGTQSFGMRHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTGTGRMSYLKKVHRSFKNGFRAG 81
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL372_DROME (Probable 60S ribosomal protein L37-B OS=Drosophila melanogaster GN=RpL37b PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.250e-27 Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = -2 Query: 303 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREG 545 M KGT SFGKR NKTHT+C RCG S+HLQKS+C+ C YPAA+ R++NWS KA RK GTGRMRYL+++ RRF++G REG Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREG 81
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_DICDI (60S ribosomal protein L37 OS=Dictyostelium discoideum GN=rpl37 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.954e-27 Identity = 52/82 (63.41%), Postives = 65/82 (79.27%), Query Frame = -2 Query: 300 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREGT 545 M KGT SFG+R K+HTLC RCG+ SFH+QK CA+C YP+A+ R+YNWS+KA RRKT GTGR RYL+ V +RF SGF+E + Sbjct: 1 MTKGTFSFGRRHTKSHTLCRRCGKSSFHIQKKTCASCGYPSAKTRSYNWSIKAQRRKTTGTGRTRYLKTVHKRFNSGFKEAS 82
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_SCHMA (60S ribosomal protein L37 OS=Schistosoma mansoni GN=RPL37 PE=3 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 1.169e-26 Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = -2 Query: 303 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREG 545 M KGT SFGKR NK+HT C RCGR+S+H+QK C++C YP+AR R YNWS KA RR+T GTGRM +L+ V RRFK GFR G Sbjct: 1 MTKGTTSFGKRHNKSHTQCRRCGRKSYHIQKKTCSSCGYPSARLRKYNWSEKAKRRRTTGTGRMLHLKRVHRRFKQGFRSG 81 The following BLAST results are available for this feature:
BLAST of CB305122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305122 ID=CB305122; Name=CB305122; organism=Citrus sinensis; type=EST; length=555bpback to top |