CB305122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_CAEEL (60S ribosomal protein L37 OS=Caenorhabditis elegans GN=rpl-37 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.206e-25 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = -2 Query: 300 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREGT 545 M KGT +FGK+ K+HTLC RCG+ SFH+QK RCA+C Y A+KRTYNW K+IRR+T GTGR R+LR V RF++GFR T Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGTT 82
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_LEIIN (60S ribosomal protein L37 OS=Leishmania infantum GN=RPL37 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.338e-22 Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = -2 Query: 309 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFR 545 M KGT S G+R +TH LC RCGR S+H+Q RCAACAYP A +R YNWSVKAI+R+ GTGR RYL+ V RR + F+ Sbjct: 1 MTKGTTSMGQRHGRTHILCRRCGRNSYHVQWERCAACAYPRASRRRYNWSVKAIKRRRTGTGRCRYLKVVNRRIANHFK 79
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_LEIDO (60S ribosomal protein L37 OS=Leishmania donovani GN=RPL37 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.338e-22 Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = -2 Query: 309 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFR 545 M KGT S G+R +TH LC RCGR S+H+Q RCAACAYP A +R YNWSVKAI+R+ GTGR RYL+ V RR + F+ Sbjct: 1 MTKGTTSMGQRHGRTHILCRRCGRNSYHVQWERCAACAYPRASRRRYNWSVKAIKRRRTGTGRCRYLKVVNRRIANHFK 79
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_SOLLC (60S ribosomal protein L37 (Fragment) OS=Solanum lycopersicum GN=RPL37 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.085e-19 Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = -2 Query: 297 RCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFREGTQ 449 RC+ACAYPAAR R YNWSVKA+RRKT GTGRMRYLR+VPRRFK+ FREGT+ Sbjct: 2 RCSACAYPAARLRKYNWSVKALRRKTTGTGRMRYLRNVPRRFKTNFREGTE 52
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_ENCCU (60S ribosomal protein L37 OS=Encephalitozoon cuniculi GN=RPL37 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.584e-15 Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = -2 Query: 309 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTPGTGRMRYLRHVPRRFKSGFR 545 M KGT SFGK+ + +C RCGR+S+H QK+ C++C YP + R S+KA RR+T GTGRMRY++ R K+G + Sbjct: 1 MSKGTASFGKKNKRNTEMCRRCGRQSYHKQKNSCSSCGYPNPKMRNPG-SIKARRRRTIGTGRMRYMKRELRAAKNGHK 78
BLAST of CB305122 vs. ExPASy Swiss-Prot
Match: RL37_METKA (50S ribosomal protein L37e OS=Methanopyrus kandleri GN=rpl37e PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.274e-11 Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = -2 Query: 375 MGKGTGSFGKR-RNKTHTLCVRCGRRSFHLQKSRCAACAYPAARK-RTYNWSVKAIRRK 545 M KGT SFGKR + KTH C RCGRR++H++K CAAC + +R+ R Y+W K + RK Sbjct: 1 MAKGTPSFGKRNKTKTHVRCRRCGRRAYHVRKGYCAACGFGRSRRIRRYSWQNKKVNRK 59 The following BLAST results are available for this feature:
BLAST of CB305122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB305122 ID=CB305122; Name=CB305122; organism=Citrus sinensis; type=EST; length=555bpback to top |