CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:574..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.135e-34
Identity = 72/91 (79.12%), Postives = 80/91 (87.91%), Query Frame = -3
Query:  274 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPE-EGGEQSKGDEVQAE 543
            +LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSL EESYK STLIMQLLRDNL LWTSD+ +   G+  +G +++ E
Sbjct:  165 DLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDMQDPAAGDDREGADMKVE 255          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.483e-34
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = -3
Query:  274 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAE 546
            +ELPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AIAELD+LSEESYK STLIMQLLRDNL LWTSD+ E G E  +  + Q +
Sbjct:  163 TELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDISESGQEDQQQQQQQQQ 253          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.483e-34
Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+LSEESYK STLIMQLLRDNL LWTSD+ E+  E+ K
Sbjct:  168 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEIK 251          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 145.206 bits (365), Expect = 1.936e-34
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = -3
Query:  238 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 546
            +ELPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AIAELD+LSEESYK STLIMQLLRDNL LWTSD+ E G         QAE      +HQ+++
Sbjct:  163 TELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMSESG---------QAEDQQQQQQHQQQQ 256          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.936e-34
Identity = 69/84 (82.14%), Postives = 78/84 (92.86%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K
Sbjct:  167 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 250          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.936e-34
Identity = 72/92 (78.26%), Postives = 80/92 (86.96%), Query Frame = -3
Query:  271 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYK STLIMQLLRDNL LWTSD  EEGG++ K    + ES
Sbjct:  166 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAAAKRES 257          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.529e-34
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            ++LP THPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELDSL EESYK STLIMQLLRDNL LWTSD  EEGG++ K
Sbjct:  167 ADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIK 250          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.529e-34
Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = -3
Query:  274 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGG----EQSKGDEVQAE 546
            ++L PTHPIRLGLALNFSVFYYEILNSP++AC+LAKQAFDEAI+ELD+L EESYK STLIMQLLRDNL LWTSDL E+GG    E SKGD  + +
Sbjct:  162 ADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVKEASKGDACEGQ 256          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433F_TOBAC (14-3-3-like protein F OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ +EG E+ K
Sbjct:  165 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDEGTEEMK 248          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433E_SHEEP (14-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+LSEESYK STLIMQLLRDNL LWTSD+  +G EQ+K
Sbjct:  161 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_CHLRE1.135e-3479.1214-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]
BMH2_YEAST1.483e-3476.92Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
14335_ORYSJ1.483e-3483.3314-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
BMH1_YEAST1.936e-3470.87Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
1433_PEA1.936e-3482.1414-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
1433_MESCR1.936e-3478.2614-3-3-like protein OS=Mesembryanthemum crystallin... [more]
1433A_HORVU2.529e-3484.5214-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14333_ORYSJ2.529e-3475.7914-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
1433F_TOBAC4.314e-3483.3314-3-3-like protein F OS=Nicotiana tabacum PE=2 SV... [more]
1433E_SHEEP4.314e-3483.3314-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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