CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:574..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433E_RAT (14-3-3 protein epsilon OS=Rattus norvegicus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+LSEESYK STLIMQLLRDNL LWTSD+  +G EQ+K
Sbjct:  161 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433E_MOUSE (14-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+LSEESYK STLIMQLLRDNL LWTSD+  +G EQ+K
Sbjct:  161 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433E_HUMAN (14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+LSEESYK STLIMQLLRDNL LWTSD+  +G EQ+K
Sbjct:  161 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433E_CHICK (14-3-3 protein epsilon OS=Gallus gallus GN=YWHAE PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+LSEESYK STLIMQLLRDNL LWTSD+  +G EQ+K
Sbjct:  161 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433E_BOVIN (14-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+LSEESYK STLIMQLLRDNL LWTSD+  +G EQ+K
Sbjct:  161 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 69/84 (82.14%), Postives = 77/84 (91.67%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K
Sbjct:  167 TELPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 250          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.634e-34
Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = -3
Query:  289 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K D
Sbjct:  167 TELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKED 252          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 5.634e-34
Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = -3
Query:  289 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 546
            +ELP THPIRLGLALNFSVFYYEI+NSPERAC LAKQ FDEAI+ELDSL+E++YK  TLI+QLLRDNL LWTSD+PE+G E  KGD
Sbjct:  164 AELPITHPIRLGLALNFSVFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPEDGEEAPKGD 249          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14333_SOLLC (14-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.634e-34
Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = -3
Query:  289 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 546
            +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYK STLIMQLLRDNL LWTSD+ ++G ++ K D
Sbjct:  168 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKED 253          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 5.634e-34
Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = -3
Query:  301 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQ 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+LSEESYK STLIMQLLRDNL LWTSD+ E+  E+
Sbjct:  168 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAEE 249          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433E_RAT4.314e-3483.3314-3-3 protein epsilon OS=Rattus norvegicus GN=Ywh... [more]
1433E_MOUSE4.314e-3483.3314-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE... [more]
1433E_HUMAN4.314e-3483.3314-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE... [more]
1433E_CHICK4.314e-3483.3314-3-3 protein epsilon OS=Gallus gallus GN=YWHAE P... [more]
1433E_BOVIN4.314e-3483.3314-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2... [more]
1433A_VICFA4.314e-3482.1414-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
1433C_TOBAC5.634e-3480.2314-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14338_SOLLC5.634e-3479.0714-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
14333_SOLLC5.634e-3480.2314-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 P... [more]
14332_ORYSJ5.634e-3484.1514-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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