CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:574..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433B_MOUSE (14-3-3 protein beta/alpha OS=Mus musculus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 5.830e-31
Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = -3
Query:  289 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 543
            E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYK STLIMQLLRDNL LWTS+   + G+  +G+
Sbjct:  161 EMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 245          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433B_MACFA (14-3-3 protein beta/alpha OS=Macaca fascicularis GN=YWHAB PE=2 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 5.830e-31
Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = -3
Query:  289 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 543
            E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYK STLIMQLLRDNL LWTS+   + G+  +G+
Sbjct:  161 EMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 245          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 5.830e-31
Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = -3
Query:  289 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 543
            E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYK STLIMQLLRDNL LWTS+   + G+  +G+
Sbjct:  161 EMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 245          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 5.830e-31
Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = -3
Query:  289 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 543
            E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYK STLIMQLLRDNL LWTS+   + G+  +G+
Sbjct:  161 EMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 245          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14331_CAEEL (14-3-3-like protein 1 OS=Caenorhabditis elegans GN=par-5 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 7.615e-31
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -3
Query:  286 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDE 543
            ++ PTHPIRLGLALNFSVFYYEILN+PE AC LAKQAFD+AIAELD+L+E+SYK STLIMQLLRDNL LWTSD+  E  EQ    E
Sbjct:  160 KMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDVGAEDQEQEGNQE 245          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433Z_DROME (14-3-3 protein zeta OS=Drosophila melanogaster GN=14-3-3zeta PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.945e-31
Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = -3
Query:  304 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDL------PEEGGE 543
            ++ PTHPIRLGLALNFSVFYYEILNSP++AC LAKQAFD+AIAELD+L+E+SYK STLIMQLLRDNL LWTSD       P+EGG+
Sbjct:  162 KMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDEAEPQEGGD 247          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.945e-31
Identity = 62/74 (83.78%), Postives = 71/74 (95.95%), Query Frame = -3
Query:  325 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSD 546
            +++ PTHPIRLGLALNFSVFYYEILN+P+RACHLAKQAFD+AIAELD+L+E+SYK STLIMQLLRDNL LWTSD
Sbjct:  127 NQMQPTHPIRLGLALNFSVFYYEILNAPDRACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 200          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 2.894e-30
Identity = 64/81 (79.01%), Postives = 72/81 (88.89%), Query Frame = -3
Query:  304 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGE 546
            ++L PTHPIRLGLALNFSVFYYEILNS E+AC +AKQAF+EAIAELD+L EESYK STLIMQLLRDNL LWTSD+ E+  E
Sbjct:  167 ADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 143B1_ONCMY (14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.779e-30
Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = -3
Query:  289 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 543
            ++ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTS+   + G+  +G+
Sbjct:  159 DMQPTHPIRLGLALNFSVFYYEILNSPEQACSLAKAAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 243          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 143B1_DANRE (14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywhab1 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 3.779e-30
Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = -3
Query:  289 ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 543
            E+ PTHPIRLGLALNFSVFYYEILN+PE+AC LAK AFDEAIAELD+L+E+SYK STLIMQLLRDNL LWTS+   + G+  +G+
Sbjct:  159 EMQPTHPIRLGLALNFSVFYYEILNTPEQACSLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 243          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_MOUSE5.830e-3176.4714-3-3 protein beta/alpha OS=Mus musculus GN=Ywhab... [more]
1433B_MACFA5.830e-3176.4714-3-3 protein beta/alpha OS=Macaca fascicularis G... [more]
1433B_HUMAN5.830e-3176.4714-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB... [more]
1433B_BOVIN5.830e-3176.4714-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
14331_CAEEL7.615e-3175.5814-3-3-like protein 1 OS=Caenorhabditis elegans GN... [more]
1433Z_DROME9.945e-3175.5814-3-3 protein zeta OS=Drosophila melanogaster GN=... [more]
14332_SCHMA9.945e-3183.7814-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
14338_ARATH2.894e-3079.0114-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
143B1_ONCMY3.779e-3074.1214-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss... [more]
143B1_DANRE3.779e-3074.1214-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywha... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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