CB305130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_TRYCR (Eukaryotic translation initiation factor 6 (Fragment) OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.200e-26 Identity = 56/108 (51.85%), Postives = 81/108 (75.00%), Query Frame = -3 Query: 174 FRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE---AQPSALVDEMRKSLID 488 FR +IA N LVGSY +N+G +VHP T +D+DE+++LLQVP+VAGT+NRG+ I +GL VNDW AFCG +TTATE++V+E +F+LR + L+ ++R +L+D Sbjct: 4 FRTSIAENALVGSYAVVNNKGCMVHPKTPAQDMDEIASLLQVPVVAGTINRGNAAIGSGLVVNDWAAFCGLNTTATEITVVERIFQLRRDLGGGRANLLQQLRDTLVD 111
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_AERPE (Translation initiation factor 6 OS=Aeropyrum pernix GN=eif6 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.814e-22 Identity = 55/128 (42.97%), Postives = 74/128 (57.81%), Query Frame = -3 Query: 243 VVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 626 V V + R +ALGN I CND L L++E + ++D LGVEV ++AG VGS +NRGGL HP S E+L LS + +VP AGT+N G E + GL N + A G DTT E++ I+ Sbjct: 98 VEVGIVPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRTGLVANSYGALVGEDTTGPEIARIQ 225
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_METST (Translation initiation factor 6 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif6 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.863e-20 Identity = 55/133 (41.35%), Postives = 80/133 (60.15%), Query Frame = -3 Query: 222 VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 620 V+ + ++L+A+GN I ND+ AL + L E + +I + L VEV +IAG +VGS + +NRG LVHP S E+LD + +L VP GTVNRG +++ A + N G+ TT EL+ I+ VF L E Sbjct: 89 VEIMPDKLTAIGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEVVETSIAGLDIVGSLVAATNRGALVHPDASEEELDLVEDVLGVPAEIGTVNRGVKLVGACIIANSNGVIVGNKTTGPELARIDQVFNLFE 221
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_METKA (Translation initiation factor 6 OS=Methanopyrus kandleri GN=eif6 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.165e-19 Identity = 52/133 (39.10%), Postives = 75/133 (56.39%), Query Frame = -3 Query: 228 VVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKL 626 V V + +++A+GN + NDH AL H DLD E+I VLG V R + G VGS +++G +VHP + E+++ +S +L V + GTVNRGS + G+ VN A G DTT EL+ +E L Sbjct: 88 VEVDVLPSKMNAVGNLVLTNDHGALVHPDLDDHALEVIESVLGGRVVRGELGGVKTVGSAGVANSKGAVVHPGATEEEMERVSEVLGVDVEVGTVNRGSPYVGVGIVVNSKGAVVGEDTTGPELARLEDALYL 220
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.571e-18 Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = -3 Query: 222 RLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 602 +L+A+GN + ND AL H +L + E+IA L VEV+R TIAG VG +N+G LVHP + +++ L L ++P+ GT N G++++ +GL N GSDTT EL IE E Sbjct: 93 KLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEIETLEKLFELPVNIGTTNFGTQMLGSGLLANSKNYLAGSDTTGPELGRIEEALGFLE 219
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.970e-18 Identity = 51/129 (39.53%), Postives = 75/129 (58.14%), Query Frame = -3 Query: 243 QVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 629 +V V+ + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R TIAG VG +NRG LVHP + ++L L + +P+ GT N GS+ + +GL N GS+TT EL +E Sbjct: 83 EVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVGMAGVVTNRGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGLLANSKGYVAGSNTTGHELGRVE 211
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_METMA (Translation initiation factor 6 OS=Methanosarcina mazei GN=eif6 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.330e-17 Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = -3 Query: 222 IEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 611 + +RL+A+GN + ND AL H +L E+IA L VEV+R TIAG VG +N+G LVHP ++ + + L + +P+ GT N G++++ +GL N GS+TT EL IE E Sbjct: 90 LPDRLNAVGNIVLANDSAALVHPELSDRALEIIARTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIGTTNFGTQMLGSGLLANSKNFVAGSETTGPELGRIEEALGFLE 219
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_PYRAE (Translation initiation factor 6 OS=Pyrobaculum aerophilum GN=eif6 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17 Identity = 51/128 (39.84%), Postives = 72/128 (56.25%), Query Frame = -3 Query: 237 VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESV 620 V I + +A+ N I + VAL L+ +++ADVLGVEV TIAGN LVG+ ++RG LV P + +DL +LS +V + GTVNRG + G+ VND A G +T EL ++ V Sbjct: 91 VDIINTKYTAISNLILAGNKVALVSPLLEPSARKVVADVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVNDNGALVGDETAGPELMRMQQV 218
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_METB6 (Translation initiation factor 6 OS=Methanoregula boonei (strain 6A8) GN=eif6 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.869e-17 Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = -3 Query: 222 ERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 605 E ++A GN I ND A H DL E E I LGVEV T+ G G +N+G +VHP + +++ L T+ +P+ GT+N GS ++ GL VND G+ T+ EL +E VF E Sbjct: 93 ETMNAAGNVIMANDTFAAVHPDLPAEVAEEIGAFLGVEVIHLTLGGVRTTGMAGVATNKGVIVHPRATAQEIARLETVSGIPVGTGTINMGSGLVGTGLLVNDTGYLAGNATSGFELGRVEDVFGFLE 220
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_HYPBU (Translation initiation factor 6 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eif6 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.869e-17 Identity = 54/137 (39.42%), Postives = 75/137 (54.74%), Query Frame = -3 Query: 225 DQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNI-LVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLR 632 D+V ++ +E R +ALGN IA N+ AL +D+ + I VLGVE Q NI VGS +NRGG+VHP S +++ L+++ V TVN G + AGL ND A G +TT EL I+ +LR Sbjct: 88 DKVRLEILEVRQTALGNLIAANNRGALVSPLIDKAILDKIKSVLGVETIYQRHLANIPTVGSMIVVTNRGGVVHPGVSDDEIRILNSVFGVEFTTATVNFGLYFVKAGLVANDHGALVGDETTGPELMRIQQALRLR 224 The following BLAST results are available for this feature:
BLAST of CB305130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305130 ID=CB305130; Name=CB305130; organism=Citrus sinensis; type=EST; length=640bpback to top |