CB305130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_SULIM (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.626e-15 Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = -3 Query: 243 VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 620 V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 92 VEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_SULIK (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eif6 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.626e-15 Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = -3 Query: 243 VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 620 V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 92 VEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_SULIA (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.16.27) GN=eif6 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.626e-15 Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = -3 Query: 243 VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 620 V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 92 VEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_PYRHO (Translation initiation factor 6 OS=Pyrococcus horikoshii GN=eif6 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.626e-15 Identity = 49/120 (40.83%), Postives = 64/120 (53.33%), Query Frame = -3 Query: 243 RLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 602 + +ALGN I ND AL R+ + I ++LGVEV R IAG VGS +N+GGLVHP TS E+L+ LS L +V + GT N G + + N G TT E+ IE Sbjct: 102 KYTALGNLILTNDKAALVSAKFSRKEAQEIGEILGVEVERGVIAGLHAVGSAGVVTNKGGLVHPETSDEELEWLSDLFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIE 221
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_PYRAB (Translation initiation factor 6 OS=Pyrococcus abyssi GN=eif6 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.626e-15 Identity = 50/125 (40.00%), Postives = 64/125 (51.20%), Query Frame = -3 Query: 228 RLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKL 602 + +ALGN I ND AL R+ + I D+LGVEV R IAG VGS +N+GGLVHP S E+L+ LS L +V + GT N G + + N G TT E+ IE L Sbjct: 102 KYTALGNLILTNDKAALVSAKFSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIEEALGL 226
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_THEVO (Translation initiation factor 6 OS=Thermoplasma volcanium GN=eif6 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.178e-15 Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = -3 Query: 237 IEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESV 611 ++++++A+GN I NDH A+ H + + I D LGVE R +I + VGS +++G LV+P T ++L+ L +V + +GT N GS + A + N G DTT E+ I+ V Sbjct: 92 LKDKINAVGNDIIANDHGAIIHKAFSNKARKEIEDTLGVETIRTSIGNILTVGSASVLTSKGMLVNPETDDDELEFLKDFFKVSVKSGTANFGSIYVGASIVANSKGILVGRDTTPIEIDRIDDV 216
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_CENSY (Translation initiation factor 6 OS=Cenarchaeum symbiosum GN=eif6 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = -3 Query: 234 IEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVF 611 ++ + +ALGN I+ ND + RE +IAD LG+EV ++ IAG VG+ ++ GG++HP T ED+ +S ++ V + T+N G +++GL N + GS T+ E+ ++ F Sbjct: 94 LDTKFTALGNMISVNDRGGVVSPVFPREEVRIIADALGIEVIQRRIAGYNQVGAMMVATSGGGIIHPETDGEDVKRISEVMGVHMEPATINGGIPFVSSGLLANKKSVVAGSFTSGPEIMMLTRAF 219
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_PYRKO (Translation initiation factor 6 OS=Pyrococcus kodakaraensis GN=eif6 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14 Identity = 49/123 (39.84%), Postives = 65/123 (52.85%), Query Frame = -3 Query: 243 EERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGV-EVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 608 + RL+ALGN I ND AL + RE I ++LGV EV R IA VGS +N+GGLVHP + E+L+ LS L V + GT N G + + + N + G TT E+ IE Sbjct: 100 KSRLTALGNLILTNDKAALVSKEFTREEANAIGEILGVDEVERGMIASYRSVGSVGVVTNKGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFVGSCMLANSYGVVVGHLTTGPEIVKIE 222
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_THEON (Translation initiation factor 6 OS=Thermococcus onnurineus (strain NA1) GN=eif6 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14 Identity = 46/126 (36.51%), Postives = 63/126 (50.00%), Query Frame = -3 Query: 243 VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 620 ++ + L+A GN I ND AL RE + + D+LGVEV R I VGS +NRGGLVHP + E+L+ L L +V + GT N G + + + N G TT E+ IE Sbjct: 96 IEPFQSTLTAFGNLILANDKAALISVKFTREEAKKLEDILGVEVERGMIGDYHAVGSVGVVTNRGGLVHPEATDEELEWLRDLFKVDIYVGTANMGVPFVGSCMLANSHGVVVGHLTTGPEIVKIE 221
BLAST of CB305130 vs. ExPASy Swiss-Prot
Match: IF6_METTH (Translation initiation factor 6 OS=Methanobacterium thermoautotrophicum GN=eif6 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14 Identity = 48/131 (36.64%), Postives = 69/131 (52.67%), Query Frame = -3 Query: 222 RIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 614 RI ER +A+GN + ND+ A+ L + ++I DVL V+V T+AG +VGS + +NRG L++P S E++ + L V GTVN G +I A N G +TT EL+ IE E Sbjct: 91 RIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIGACSVANSNGVLVGEETTGPELARIEEALGFLE 221 The following BLAST results are available for this feature:
BLAST of CB305130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305130 ID=CB305130; Name=CB305130; organism=Citrus sinensis; type=EST; length=640bpback to top |