CB305132

Overview
NameCB305132
Unique NameCB305132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig305 contig Csv1_Contig305:458..1144. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 38/59 (64.41%), Postives = 51/59 (86.44%), Query Frame = -3
Query:  451 SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 627
            +RCS C+KRVGLTGF+CRCG+L+C  HRYSD+H C +DY++AARDAI + NPV++A K+
Sbjct:  103 NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = -3
Query:  442 PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 642
            PK   +RC SC K+VG+TGFKCRCG+ +C +HRY + H C FD++  AR+AI KANPV+KA+K+D I
Sbjct:  102 PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = -3
Query:  442 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 675
            + E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ +I
Sbjct:  147 SEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = -3
Query:  442 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 675
            + E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ +I
Sbjct:  132 SEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = -3
Query:  442 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 675
            + E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ +I
Sbjct:  147 SEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = -3
Query:  442 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 675
            + E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ +I
Sbjct:  132 SEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = -3
Query:  442 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 675
            + E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ +I
Sbjct:  132 SEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 39/78 (50.00%), Postives = 56/78 (71.79%), Query Frame = -3
Query:  442 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 675
            A+E  E+  ++P    +RC SC K+VG+ GFKC+CG+ +C SHRY +KH C FD++   RDAI KANP++KA+K+  I
Sbjct:   98 AAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 37/72 (51.39%), Postives = 55/72 (76.39%), Query Frame = -3
Query:  442 SVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 657
            + E   ++ P+RC++C+KRVGLTGFKCRCG ++C  HRY + H C +D+++A R+ I KANP++KA KL +I
Sbjct:   99 TTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = -3
Query:  442 EAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 651
            E  PK   +RC SC+K+VGLTGFKCRCG  +C  HRY+D H C FDY+   R+ I K NP++KA+K+ +I
Sbjct:   91 EDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160          
The following BLAST results are available for this feature:
BLAST of CB305132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP1_ORYSI9.540e-2064.41Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH9.540e-2058.21Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_RAT2.125e-1953.85AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_PONAB2.125e-1953.85AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_MOUSE2.125e-1953.85AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]
ZFAN6_HUMAN2.125e-1953.85AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN6_BOVIN2.125e-1953.85AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP7_ARATH2.125e-1950.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH4.734e-1951.39Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ6.183e-1954.29Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_F05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_F05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305132 ID=CB305132; Name=CB305132; organism=Citrus sinensis; type=EST; length=686bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTACCGAAACCATAATTAAAAATT
TACAGAGGCTAAGCGCAAGAATTGTCCATGTATGTTTTCCACATCATATG
GAAATAGCACAACCATCTTTTTCTGAATTTTTTTTTTAAGCAGAAACTAA
TAAAGTGAAATGCCATATGAAACATAATGACAAATTGGAAAGCTATCCAA
AAGTCCATAAAACCAGAGCACAGATTCACTCTTAAACACTGAAGCCAACA
TATAAGTTCTCGCCAACACACGACATAGAGTTCTTCATACTGCAGAGATG
TCCTATAACTGATAATGGGCCCCCAGCATATATAACATTAAAGGACACCT
GATAAGATACGTGGCCTTCTCAGAAGAAGCCTCTAACAGATGAGCAAGAT
CATCATTCTTTGATTATTGAAACCTCATCCCATTGAATCTAGATTTCATC
TAGCTTCTCAGCCTTGATCACAGGGTTTGCTTTAATTATAGCATCCCTAG
CAGCAGTGCGGTAGTCAAAGGGGCAGTTATGTTTGTCCGAATAGCGATGT
GACACACAGTATAAGTTACCACAGCGACATTTGAATCCTGTTAAACCAAC
ACGCTTCTTGCAACTGCTGCACCGGCTGGGACCCTCCTTCGGCTTTGCCT
CCACACTCTCGCTCAATTCTGAAGCACATGATGGCT
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