CB305132

Overview
NameCB305132
Unique NameCB305132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig305 contig Csv1_Contig305:458..1144. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = -3
Query:  451 SESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 663
            S S  A  K  P+RC +C+K+VGL GF+CRCG  +C +HR++DKH C FD++ + R+ I K NP+I A K+
Sbjct:  153 SSSAAAAAK--PNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKI 221          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 32/55 (58.18%), Postives = 44/55 (80.00%), Query Frame = -3
Query:  451 SCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 615
            +CKK+VGL GF CRCG+L+  SHRY ++H+CP DY++AA D + K NPV+K +KL
Sbjct:   68 ACKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKL 122          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = -3
Query:  442 KEGPSRCSSCKKRVGL-TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 639
            K+  + C  C K+ GL + ++CRCGN +C SHRY++ H C +DY++A R  + +ANPV+ A KL +I
Sbjct:  661 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNAPKLPKI 727          
BLAST of CB305132 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = -3
Query:  442 SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDEI 627
            +RC +C+K+VGL GF CRCG ++C +H       C FDY+ A R+AI + NP++ A K+++I
Sbjct:   97 NRCKACRKKVGLLGFPCRCGGMFCGAHA------CAFDYKAAGREAIARHNPLVVAPKINKI 152          
The following BLAST results are available for this feature:
BLAST of CB305132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP12_ORYSJ4.148e-1549.30Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ARATH7.075e-1558.18Putative zinc finger A20 and AN1 domain-containing... [more]
ANUB1_HUMAN2.516e-1244.78AN1-type zinc finger and ubiquitin domain-containi... [more]
SAP10_ORYSJ2.782e-1145.16Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_F05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_F05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305132 ID=CB305132; Name=CB305132; organism=Citrus sinensis; type=EST; length=686bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTACCGAAACCATAATTAAAAATT
TACAGAGGCTAAGCGCAAGAATTGTCCATGTATGTTTTCCACATCATATG
GAAATAGCACAACCATCTTTTTCTGAATTTTTTTTTTAAGCAGAAACTAA
TAAAGTGAAATGCCATATGAAACATAATGACAAATTGGAAAGCTATCCAA
AAGTCCATAAAACCAGAGCACAGATTCACTCTTAAACACTGAAGCCAACA
TATAAGTTCTCGCCAACACACGACATAGAGTTCTTCATACTGCAGAGATG
TCCTATAACTGATAATGGGCCCCCAGCATATATAACATTAAAGGACACCT
GATAAGATACGTGGCCTTCTCAGAAGAAGCCTCTAACAGATGAGCAAGAT
CATCATTCTTTGATTATTGAAACCTCATCCCATTGAATCTAGATTTCATC
TAGCTTCTCAGCCTTGATCACAGGGTTTGCTTTAATTATAGCATCCCTAG
CAGCAGTGCGGTAGTCAAAGGGGCAGTTATGTTTGTCCGAATAGCGATGT
GACACACAGTATAAGTTACCACAGCGACATTTGAATCCTGTTAAACCAAC
ACGCTTCTTGCAACTGCTGCACCGGCTGGGACCCTCCTTCGGCTTTGCCT
CCACACTCTCGCTCAATTCTGAAGCACATGATGGCT
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