CB305154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.686e-26 Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = -2 Query: 255 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRV 530 A+TCGQV++++ PC+ + R G P CCSGVRSLN AARTT DR+AACNCLK A IRG+ AA +PS+CGV IPY IS STDC RV Sbjct: 30 AVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.686e-26 Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = -2 Query: 252 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 542 P A+TCGQVTA LAPC+P+L+ GR P CC GV++L G+A+TT DR+ AC CLK A I+GI N AAG+PS C V IPYKISPSTDC V+ Sbjct: 20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.202e-26 Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = -2 Query: 252 AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 530 A+T GQVT SLAPCI +LR +G PP CC+G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CGV IPYKISPSTDC V+ Sbjct: 27 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.202e-26 Identity = 58/97 (59.79%), Postives = 69/97 (71.13%), Query Frame = -2 Query: 252 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 542 P A+TCGQVTA LAPC+P+L+ GR P CC GV+ L G+A+TT DR+ AC CLK A I+GI N AAG+PS C V IPYKISPSTDC V+ Sbjct: 20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.202e-26 Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = -2 Query: 252 AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 530 A+T GQVT SLAPCI +LR +G PP CC+G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CGV IPYKISPSTDC V+ Sbjct: 23 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.755e-26 Identity = 56/92 (60.87%), Postives = 66/92 (71.74%), Query Frame = -2 Query: 255 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRV 530 AI+CGQV +++APCI + R G P CCSGVRSLN AARTT DR+AACNCLK A + G+ AA +PS+CGV IPY IS STDC RV Sbjct: 28 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26 Identity = 54/93 (58.06%), Postives = 69/93 (74.19%), Query Frame = -2 Query: 252 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 530 AI+CG V+ +L PC+ +L+ GG P P CC GV+ LNGAARTT DR+AACNCLK + G+I G+KP A LP +CGVR+PY IS ST+C +R Sbjct: 26 AISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 56/93 (60.22%), Postives = 67/93 (72.04%), Query Frame = -2 Query: 252 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 530 AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C V+ Sbjct: 18 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25 Identity = 56/93 (60.22%), Postives = 67/93 (72.04%), Query Frame = -2 Query: 252 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 530 AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C V+ Sbjct: 26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117
BLAST of CB305154 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = -2 Query: 252 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 530 AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS +T+C V+ Sbjct: 26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117 The following BLAST results are available for this feature:
BLAST of CB305154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305154 ID=CB305154; Name=CB305154; organism=Citrus sinensis; type=EST; length=666bpback to top |