CB322092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFA_ORYSJ (Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.943e-51 Identity = 91/134 (67.91%), Postives = 114/134 (85.07%), Query Frame = 2 Query: 2 LRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIV 403 LRRHA+ECLPPLDMS PTQEL KDLHG+EWRF+HI+RGQPRRHLL +GWS FV+SK+L++GDAF++LR E GE RVGVRR +++Q +P+SVISS SMHLGVLA+A HA+ T ++F VYY+PR S S++IV Sbjct: 140 LRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIV 273
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 199.134 bits (505), Expect = 5.652e-51 Identity = 96/134 (71.64%), Postives = 113/134 (84.33%), Query Frame = 2 Query: 2 LRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIV 403 LR+HA ECLP LDM++ PTQEL A+DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR +QQ +P+SVISS SM LGVLATA HAV+T T+F V+YKPR S+FI+ Sbjct: 163 LRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFII 294
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSJ (Auxin response factor 17 OS=Oryza sativa subsp. japonica GN=ARF17 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 2.010e-48 Identity = 86/134 (64.18%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ +N +L +G+RRA R Q +PSSV+SS SMH+G+LA A HA ST + FT++Y PR SPSEF++P Sbjct: 153 RRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIP 286
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSI (Auxin response factor 17 OS=Oryza sativa subsp. indica GN=ARF17 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 2.010e-48 Identity = 86/134 (64.18%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ +N +L +G+RRA R Q +PSSV+SS SMH+G+LA A HA ST + FT++Y PR SPSEF++P Sbjct: 153 RRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIP 286
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFY_ORYSJ (Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 3.429e-48 Identity = 86/134 (64.18%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+ +N +L +G+RRA RQQ +PSSV+SS SMH+G+LA A HA +T + FT++Y PR SPSEF++P Sbjct: 151 RRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIP 284
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFF_ORYSJ (Auxin response factor 6 OS=Oryza sativa subsp. japonica GN=ARF6 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 7.639e-48 Identity = 85/134 (63.43%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ ++ +L +G+RRA R Q +PSSV+SS SMH+G+LA A HA ST + FT++Y PR SPSEF++P Sbjct: 153 RRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIP 286
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFF_ORYSI (Auxin response factor 6 OS=Oryza sativa subsp. indica GN=ARF6 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 7.639e-48 Identity = 85/134 (63.43%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ ++ +L +G+RRA R Q +PSSV+SS SMH+G+LA A HA ST + FT++Y PR SPSEF++P Sbjct: 153 RRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIP 286
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFF_ARATH (Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 PE=2 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 1.103e-46 Identity = 84/134 (62.69%), Postives = 108/134 (80.60%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ + +L +G+RRA R Q +PSSV+SS SMHLG+LA A HA +T + FT++Y PR SPSEF++P Sbjct: 148 RRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIP 281
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFV_ARATH (Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 1.220e-45 Identity = 86/137 (62.77%), Postives = 106/137 (77.37%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQ 415 ++HA ECLPPLDMS+ PTQEL A DLHGN+WRF H +RG P+RHLL +GW+ F +SK+LVAGD +F+RGE GELRVG+RRA QQGN+PSS+IS SM GV+A+A HA MF V YKPR+ S+FIV YD+ Sbjct: 143 KKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDK 277
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFL_ORYSJ (Auxin response factor 12 OS=Oryza sativa subsp. japonica GN=ARF12 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.717e-45 Identity = 81/134 (60.45%), Postives = 106/134 (79.10%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A+ PPLD ++QPP QEL A+D+H EW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS SMH+G+LA A HA +T + FT++Y PR SPSEF++P Sbjct: 154 RRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIP 287 The following BLAST results are available for this feature:
BLAST of CB322092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322092 ID=CB322092; Name=CB322092; organism=Citrus sinensis; type=EST; length=415bpback to top |