CB322092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFL_ORYSI (Auxin response factor 12 OS=Oryza sativa subsp. indica GN=ARF12 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.717e-45 Identity = 81/134 (60.45%), Postives = 106/134 (79.10%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A+ PPLD ++QPP QEL A+D+H EW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS SMH+G+LA A HA +T + FT++Y PR SPSEF++P Sbjct: 154 RRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIP 287
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFS_ORYSJ (Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 1.032e-44 Identity = 80/135 (59.26%), Postives = 104/135 (77.04%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPY 409 RR A++ PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ IF+R E +L +G+RRA RQ N+ SSV+SS SMH+G+LA A HA + + FT++Y PR SP+EF++P+ Sbjct: 173 RRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPF 307
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFN_ARATH (Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 1.761e-44 Identity = 83/137 (60.58%), Postives = 105/137 (76.64%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQ 415 ++HA ECLPPLDMS+ PTQE+ A DLHGN+WRFRHI+RG +RHLL GW+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S SM G++A+A HA MF V YKPR+ S+FIV YD+ Sbjct: 145 KKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDK 279
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFE_ARATH (Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 3.923e-44 Identity = 81/134 (60.45%), Postives = 102/134 (76.12%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD S QPPTQEL +DLH N W FRHI+RGQP+RHLL +GWS+FV SKRL AGD+ +F+R E +L VGVRRA RQQ +PSSV+S+ SMH+GVLA A HA + T F ++Y PR P+EF++P Sbjct: 177 RRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIP 310
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSJ (Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.124e-44 Identity = 79/134 (58.96%), Postives = 104/134 (77.61%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD + QPP QEL AKDLH W+FRHI+RGQP+RHLL +GWSVFVS+KRL+AGD+ +F+R E +L +G+RRA R Q + SSV+SS SMH+G+LA A HA + + FT++Y PR SPSEF++P Sbjct: 146 RRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIP 279
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSI (Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.124e-44 Identity = 79/134 (58.96%), Postives = 104/134 (77.61%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD + QPP QEL AKDLH W+FRHI+RGQP+RHLL +GWSVFVS+KRL+AGD+ +F+R E +L +G+RRA R Q + SSV+SS SMH+G+LA A HA + + FT++Y PR SPSEF++P Sbjct: 146 RRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIP 279
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSJ (Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.124e-44 Identity = 81/134 (60.45%), Postives = 103/134 (76.87%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ P LD S QPP QEL +DLH N W FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E +L +GVRRA RQQ + SSV+S+ SMH+GVLA A HA S+G+ FT+YY PRTSPS F++P Sbjct: 162 RRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIP 295
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSI (Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11 PE=2 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 5.124e-44 Identity = 81/134 (60.45%), Postives = 103/134 (76.87%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ P LD S QPP QEL +DLH N W FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E +L +GVRRA RQQ + SSV+S+ SMH+GVLA A HA S+G+ FT+YY PRTSPS F++P Sbjct: 162 RRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIP 295
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFL_ARATH (Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 8.740e-44 Identity = 83/137 (60.58%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQ 415 ++HA ECLP LDMS+ P QEL A DLHGN+WRF H +RG P+RHLL +GW+ F +SK+LVAGD +F+RGE GELRVG+RRA QQGN+PSS++S M GV+A+A HA MFTV YKPR+ S+FIV YD+ Sbjct: 145 KKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDK 279
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFE_ORYSJ (Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5 PE=2 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 8.740e-44 Identity = 79/135 (58.52%), Postives = 103/135 (76.30%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPY 409 RR A++ PPLD S QPP QEL A+D+H N W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ I +R E +L +G+RRA RQ N+ SSV+SS SMH+GVLA A HA + + FT++Y PR SP+EF++P+ Sbjct: 167 RRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPF 301 The following BLAST results are available for this feature:
BLAST of CB322092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322092 ID=CB322092; Name=CB322092; organism=Citrus sinensis; type=EST; length=415bpback to top |