CB322092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFS_ARATH (Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19 PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 1.491e-43 Identity = 80/134 (59.70%), Postives = 102/134 (76.12%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ PPLD S QPP QE+ AKDLH W FRHI+RGQP+RHLL +GWSVFVS+KRL AGD+ +F+R E +L +G+RRA RQ + SSVISS SMH+G+LA A HA + + FT+++ PR SPSEF+VP Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVP 278
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFH_ARATH (Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 1.491e-43 Identity = 82/133 (61.65%), Postives = 104/133 (78.20%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIV 403 RR A++ PPLD + QPP QEL A+DLH EW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E +L +G+R A R Q VPSSV+SS SMH+G+LA A HA +T + FTV++ PR S SEF++ Sbjct: 145 RRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVI 277
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFO_ARATH (Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15 PE=3 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 1.947e-43 Identity = 82/137 (59.85%), Postives = 103/137 (75.18%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQ 415 ++HA ECLPPLDMS+ P QEL A DLHGN+W FRH +RG P+RHLL +GW+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S M GV+A+A HA MF V YKPR+ S+FIV YD+ Sbjct: 145 KKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDK 279
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFO_ORYSJ (Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.543e-43 Identity = 80/135 (59.26%), Postives = 102/135 (75.56%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPY 409 RR A++C PPLD S+Q P+QEL AKDLH EWRFRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA + + + + +LG LA HAV+T ++F +YY PR S SEFIVPY Sbjct: 161 RRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVATESVFNIYYNPRLSQSEFIVPY 295
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFU_ORYSJ (Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 7.399e-43 Identity = 78/135 (57.78%), Postives = 101/135 (74.81%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPY 409 RR A+ P LD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FVS KRL+AGD+ +F+R +L +G+RRA RQ N+ SSV+SS SMH+G+LA A HA + + FT+YY PR S SEF++P+ Sbjct: 151 RRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPF 285
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFG_ARATH (Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 9.663e-43 Identity = 80/134 (59.70%), Postives = 102/134 (76.12%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 406 RR A++ P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVFVS+KRL AGD+ +F+R +L +G+RRA RQQ + SSVISS SMH+GVLA A HA + + FT++Y PR +P+EF+VP Sbjct: 146 RRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVP 279
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFU_ARATH (Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21 PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 3.672e-42 Identity = 79/137 (57.66%), Postives = 103/137 (75.18%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQ 415 ++HA ECLPPLDMS+ P QE+ A DLH N+WRFRH +RG P+RH L +GW+ F++SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S M GV+A+A HA +F V YKPR+ S+FIV YD+ Sbjct: 145 KKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCIFIVVYKPRS--SQFIVSYDK 279
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.395e-41 Identity = 77/137 (56.20%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQ 415 RR A++C PLD +Q P+QEL AKDLHG EW+FRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR E GELR+G+RRA R + +P S+I +S +L+ +AVST +MF V+Y PR + +EF++PY++ Sbjct: 196 RRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEK 331
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFT_ARATH (Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 1.822e-41 Identity = 78/137 (56.93%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQ 415 ++HA ECLPPL + P QEL AKDLHGN+WRFRH +RG P+RH L +GW+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S M GV+A+A HA+ +F V YKP S+FIV YD+ Sbjct: 145 KKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDK 277
BLAST of CB322092 vs. ExPASy Swiss-Prot
Match: ARFB_ORYSJ (Auxin response factor 2 OS=Oryza sativa subsp. japonica GN=ARF2 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.302e-41 Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 2 Query: 5 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPY 409 RR A++C PPLD S Q P QEL AKDLHG EWRFRHI+RGQPRRHLL +GWS F++ K+LV+GDA +FLRGE+GELR+GVRRA + + P + + + L+ HAV+ ++F +YY PR S SEFI+PY Sbjct: 166 RRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPY 300 The following BLAST results are available for this feature:
BLAST of CB322092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322092 ID=CB322092; Name=CB322092; organism=Citrus sinensis; type=EST; length=415bpback to top |