CB322099

Overview
NameCB322099
Unique NameCB322099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length337
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13040 contig Csv1_Contig13040:179..515. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLCA_RICCN (ADP,ATP carrier protein 1 OS=Rickettsia conorii GN=tlcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.937e-15
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGS--LANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 254
            SLFD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +     +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  407 SLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFILFPAFGFVEATPYFASIFFVIVILWIYAVKGLNKEYKVL 492          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLCD_RICCN (ADP,ATP carrier protein 4 OS=Rickettsia conorii GN=tlcD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.327e-12
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 245
            +LFD  KEMAY+PLD + K+KGKAA DV+   LGKSG A +Q   F+IL   S  + +  L  I ++  L WL A ++L+ ++
Sbjct:  421 TLFDSTKEMAYVPLDPEIKIKGKAAADVIGTKLGKSGSAFLQSLVFIILPSASYQSISTCLMIIFIITCLTWLWATKALNKEY 503          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLCD_RICFE (ADP,ATP carrier protein 4 OS=Rickettsia felis GN=tlcD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12
Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 245
            +LFD  KEMAY+PLD + K+KGKAA DV+   LGKSG A +Q   F+IL   S  + +  L  I ++  L WL A + L+ ++
Sbjct:  421 TLFDSTKEMAYVPLDPEIKIKGKAAADVIGTKLGKSGSAFLQSLVFIILPSASYQSISICLMIIFIITCLTWLWATKELNKEY 503          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLCD_RICBR (ADP,ATP carrier protein 4 OS=Rickettsia bellii (strain RML369-C) GN=tlcD PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 245
            +LFD  KEMAY+PLD++ K+KGKAA DV+   LGKSG A +Q   F+IL   S  + +  L  I ++  L W  A + L+ ++
Sbjct:  430 TLFDSTKEMAYVPLDKEIKIKGKAAADVLGTKLGKSGSAFLQSLVFIILPSASYQSISVCLMFIFIITCLIWFWAVKELNKEY 512          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLC2_CHLPN (ADP,ATP carrier protein 2 OS=Chlamydia pneumoniae GN=tlcB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11
Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQF 245
            + FD  KEMA+IPL  + K  GKAAID V + +GKSGG+LI Q +++ F S+A S   +  +LL+I++ W+     +  ++
Sbjct:  423 TFFDQTKEMAFIPLSPEDKNHGKAAIDGVVSRIGKSGGSLIYQGLLVIFSSVAASLNVIALVLLIIMVVWIAVVAYIGKEY 503          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLC2_CHLTR (ADP,ATP carrier protein 2 OS=Chlamydia trachomatis GN=tlcB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    9 FDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILL------VIVLAWLGAARSLDTQ 242
            FD  KEMA+IPL++D K  GKAAID V + +GKSGG+L+ Q +++ F S+A S   +  +LL      + V+AWLG   +  T+
Sbjct:  422 FDQTKEMAFIPLEDDEKNYGKAAIDGVISRVGKSGGSLVYQGLLIIFSSVAASLNAITIVLLLALGSWIFVIAWLGREYTAKTE 505          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLC2_CHLMU (ADP,ATP carrier protein 2 OS=Chlamydia muridarum GN=tlcB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.389e-11
Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 3
Query:    9 FDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILL------VIVLAWLGAARSLDT 239
            FD  KEMA+IPL++D K  GKAAID V + +GKSGG+L+ Q +++ F S+A+    +  +LL      + V+AWLG   S+ T
Sbjct:  422 FDQTKEMAFIPLEDDEKDYGKAAIDGVISRVGKSGGSLVYQALLIIFSSVADCMNAITIVLLLALGGWIWVVAWLGKEYSVRT 504          
The following BLAST results are available for this feature:
BLAST of CB322099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
TLCA_RICCN2.937e-1545.35ADP,ATP carrier protein 1 OS=Rickettsia conorii GN... [more]
TLCD_RICCN2.327e-1244.58ADP,ATP carrier protein 4 OS=Rickettsia conorii GN... [more]
TLCD_RICFE5.184e-1244.58ADP,ATP carrier protein 4 OS=Rickettsia felis GN=t... [more]
TLCD_RICBR1.155e-1143.37ADP,ATP carrier protein 4 OS=Rickettsia bellii (st... [more]
TLC2_CHLPN1.155e-1140.74ADP,ATP carrier protein 2 OS=Chlamydia pneumoniae ... [more]
TLC2_CHLTR1.970e-1144.05ADP,ATP carrier protein 2 OS=Chlamydia trachomatis... [more]
TLC2_CHLMU4.389e-1144.58ADP,ATP carrier protein 2 OS=Chlamydia muridarum G... [more]

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Properties
Property NameValue
Genbank descriptionEST0208 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB024 similar to plastidic ADP/ATP transporter (acc# AAM29152), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322099 ID=CB322099; Name=CB322099; organism=Citrus sinensis; type=EST; length=337bp
ACAGCTTGTTTGATCCTTGCAAAGAAATGGCCTACATTCCATTAGATGAA
GACACCAAGGTTAAAGGGAAGGCAGCCATCGATGTTGTGTGCAACCCGTT
GGGGAAATCTGGAGGAGCTCTTATTCAGCAGTTTATGATATTAACCTTTG
GGTCCCTTGCGAATTCAACTCCTTATCTTGGGGGGATACTTTTGGTGATT
GTTCTTGCATGGTTAGGAGCAGCCAGGTCTTTAGATACCCAATTTACAGC
TTTGCGTCAGGAAGAAGAGCTTGAGAAGGAGATGGAAAGAGCTGCTGTTA
AGATCCCAGTTGTCTCTGAAAATGAAGGCGGGAATGG
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