CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_NITMU (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=dxs PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.344e-50 Identity = 103/196 (52.55%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA +G+KP AIYS+FLQR YDQ++HDV +Q LPV FA+DRAGLVGADGPTH G+FD+T++ C+PN+ VMAPSDE E M+ TA + + P+ R+PRG+G G + PL G+G I EG +A+L +GS++Q C+ AA ++++ TVA+ RF KPLD DL+ LA HE+L+TVEE +V GG GS Sbjct: 373 LACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLTYLRCIPNITVMAPSDENECRQMLYTAFQM-NTPAAVRYPRGSGSGVAQQKEMQMLPL--GRGEIRREGAEIALLAFGSMLQPCLEAA-----EELNATVANMRFVKPLDDDLVASLAANHELLVTVEENTVMGGAGS 560
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ALHEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.755e-50 Identity = 107/196 (54.59%), Postives = 137/196 (69.90%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA E VKP AIYS+FLQRGYDQ+VHDV LQ LPV FA+DRAGLVGADGPTH G+FD++++ C+PNM + APSDEAE +++T D P R+PRG+G GA LP + PL IGKG G R+A+L +G++V + A L +TVAD RF +PLD LIR+LA+ H++L+TVEE +V GG GS Sbjct: 380 LACESVKPVLAIYSTFLQRGYDQLVHDVALQNLPVLFAVDRAGLVGADGPTHHGSFDLSYLRCVPNMTIAAPSDEAECWRLLST-GYHHDGPFAVRYPRGSGPGAALPEADL-DPLAIGKGVCRRRGRRIAVLAFGTLVVPALAVAEAL-----DLTVADMRFVRPLDEALIRELADTHDLLVTVEENAVAGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SHEB8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS185) GN=dxs PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.293e-50 Identity = 103/195 (52.82%), Postives = 133/195 (68.21%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A EG KP AIYS+FLQR YDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG GA T L IGKG I G R+AIL +G+ +LA+ + ++ + TV D RF KPLD DL++++A HE+L+TVEE ++ GG G+ Sbjct: 381 ACEGFKPVVAIYSTFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGAT--QVEAMTALPIGKGVIKRVGKRIAILNFGT-----LLASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGA 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SHEB2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS223) GN=dxs PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.293e-50 Identity = 103/195 (52.82%), Postives = 133/195 (68.21%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A EG KP AIYS+FLQR YDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG GA T L IGKG I G R+AIL +G+ +LA+ + ++ + TV D RF KPLD DL++++A HE+L+TVEE ++ GG G+ Sbjct: 381 ACEGFKPVVAIYSTFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGAT--QVEAMTALPIGKGVIKRVGKRIAILNFGT-----LLASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGA 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PROMP (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxs PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.293e-50 Identity = 101/196 (51.53%), Postives = 140/196 (71.43%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 ++ +G+KP AIYS+FLQR +DQ++HDV +Q LPV F +DRAG+VGADGPTH G +DI++M +PN V+MAP DEAEL M+ T ++ P+ R PRG+G+G V + PL+IG+G IL EGD V I+ YGS+VQ AN+LK++ IS + +ARF +PLD DLI L + + ++T+EEG+ VGGFGS Sbjct: 380 MSCDGLKPVVAIYSTFLQRAFDQLIHDVGIQNLPVSFVLDRAGIVGADGPTHQGQYDISYMRAIPNFVLMAPKDEAELQRMLIT-SINYKGPTALRIPRGSGLG-VAVMDEGWEPLKIGEGEILEEGDDVLIIAYGSMVQSATETANLLKNRGISACIINARFVRPLDQDLIIPLVRKLKKVVTMEEGTLVGGFGS 573
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_VIBHB (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dxs PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.911e-50 Identity = 103/192 (53.65%), Postives = 136/192 (70.83%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGG 576 +A G P AIYS+FLQRGYDQ++HDV + LPV FA+DRAGLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T PS R+PRG+G+G + T LEIGKGRI+ +G++VAIL +G+ + + AA ++++ TVAD RF KPLD LIRQLA EH++L+T+EE ++ G Sbjct: 380 MAIAGDHPIVAIYSTFLQRGYDQLIHDVAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HTGPSAVRYPRGSGMGTDI--EKDFTALEIGKGRIVRKGEKVAILSFGTFLGNALEAA-----ENLNATVADMRFVKPLDEALIRQLAAEHDVLVTLEENAIAG 563
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_RALME (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dxs PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.911e-50 Identity = 106/201 (52.74%), Postives = 137/201 (68.16%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGS 585 LA EG+KP AIYS+FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADG TH G +DI F+ C+PNM+VM P+DE E ++ T A D P+ R+PRG G+G P + T L +GKG I E G RVAI+ +GS+V + AA + + TVA+ RF KPLD +L++QLA H+ L+TVEEG ++GG GS Sbjct: 380 LACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMVPADENECRQLL-TTAFQQDCPTAVRYPRGAGVGVATQP--ELTALPVGKGEIRREGHARAGQRVAIMAFGSMVHPALTAA-----EQLDATVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGS 572
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SHESW (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain W3-18-1) GN=dxs PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.108e-50 Identity = 102/195 (52.31%), Postives = 133/195 (68.21%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T + PS R+PRG+ GA T L IGKG I G R+A+L +G+ + + AA+ ++ TV D RF KPLD +L+ ++A H+IL+TVEE ++ GG GS Sbjct: 381 ACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYNAGPSAVRYPRGSATGAT--QVEAMTALPIGKGVIKRVGKRIALLNFGTTLASALTAAD-----NLDATVVDMRFVKPLDAELVTEMAQTHDILVTVEENAIMGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SHEPC (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=dxs PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.108e-50 Identity = 102/195 (52.31%), Postives = 133/195 (68.21%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T + PS R+PRG+ GA T L IGKG I G R+A+L +G+ + + AA+ ++ TV D RF KPLD +L+ ++A H+IL+TVEE ++ GG GS Sbjct: 381 ACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYNAGPSAVRYPRGSATGAT--QVEAMTALPIGKGVIKRVGKRIALLNFGTTLASALTAAD-----NLDATVVDMRFVKPLDAELVTEMAQTHDILVTVEENAIMGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SHELP (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=dxs PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.108e-50 Identity = 102/195 (52.31%), Postives = 132/195 (67.69%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A EG KP AIYS+FLQRGYDQ++HDV LQKLPV FA+DR G+VG DGPTH GAFD+++M +PNMV+MAPSDE E M+ T ++ P+ R+PRG+ G P T EIGKG I EG ++AIL +G+ + AA L T+AD RF KPLD +L++QLA H++L+TVEE ++ GG GS Sbjct: 381 ACEGYKPVLAIYSTFLQRGYDQLIHDVALQKLPVIFAIDRGGIVGPDGPTHQGAFDLSYMRAIPNMVIMAPSDENECRQMLYTGYCYNEGPTAIRYPRGSATGE--PQVETMTAYEIGKGLIKREGKKIAILNFGTTLASASQAAEAL-----DATLADMRFVKPLDVELVKQLATSHDLLVTVEENAIMGGAGS 568 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |