CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_YERPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pseudotuberculosis GN=dxs PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.712e-50 Identity = 103/196 (52.55%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQ++HDV +Q LPV FA+DR GLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T + P+ R+PRGNG GAVL P L IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRGGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYT-GYHHNGPAAVRYPRGNGTGAVLEPLEM---LPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGS 566
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_YERPB (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=dxs PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.712e-50 Identity = 103/196 (52.55%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQ++HDV +Q LPV FA+DR GLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T + P+ R+PRGNG GAVL P L IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRGGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYT-GYHHNGPAAVRYPRGNGTGAVLEPLEM---LPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGS 566
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_THIDA (1-deoxy-D-xylulose-5-phosphate synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dxs PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.712e-50 Identity = 101/192 (52.60%), Postives = 133/192 (69.27%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGG 576 LA EGVKP AIYS+FLQR YDQ++HD+ LQ LPV A+DRAGLVGADGPTH G+FD++F+ C+P++V+ APSDE E +++T A + D P+ R+PRG G GA + P + P+EIGKG G VA+L +GS+V + AA L TVAD RF KPLD DL+ +LA H +L+T+EE +V G Sbjct: 374 LACEGVKPVVAIYSTFLQRAYDQLIHDIALQNLPVTLAIDRAGLVGADGPTHAGSFDLSFLRCVPDLVIAAPSDENECRRLLST-AFLHDGPAAVRYPRGCGTGAAIEPGLE--PVEIGKGVCRRRGRDVALLAFGSLVAPALTAAERL-----DATVADMRFVKPLDVDLVGELAAGHRLLVTLEENAVAG 557
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SHEFN (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella frigidimarina (strain NCIMB 400) GN=dxs PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49 Identity = 98/195 (50.26%), Postives = 134/195 (68.72%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A G+KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNM++MAPSDE E M+ T D P+ R+PRG GA + T + IGKG + +G ++AI+ +G+ ++ AA + + T+AD RF KPLD L+ QLAN H++++TVEE ++ GG GS Sbjct: 381 ACAGLKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMIIMAPSDENECRQMLYTGYCYQDGPTAVRYPRGFATGA--EQIDTMTMIPIGKGVLTRQGQKIAIVNFGTTLEAATDAA-----EKLDATIADMRFVKPLDLGLLEQLANSHDVIVTVEENAIMGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PROM4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=dxs PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49 Identity = 102/196 (52.04%), Postives = 134/196 (68.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A +G++P AIYS+FLQR YDQ++HDV +QKLPV F +DRAG+VGADGPTH G +DI+++ +PN VMAP DEAEL M+ T + +D P R PRG+G G L PL+IG+G IL +GD + IL YGS+V V A +LK IS TV +ARF +PLD LI LA ++T+EEG++ GGFGS Sbjct: 380 MACDGLRPVVAIYSTFLQRAYDQLIHDVGIQKLPVTFVLDRAGIVGADGPTHQGQYDISYLRSVPNFTVMAPKDEAELQRMLVT-CLENDGPCALRIPRGSGEGVTLMEEG-WEPLKIGRGEILEDGDDLLILAYGSMVTPAVQTAELLKQAGISSTVVNARFLRPLDQALIHPLARRIGKVVTIEEGALGGGFGS 573
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PHOPR (1-deoxy-D-xylulose-5-phosphate synthase OS=Photobacterium profundum GN=dxs PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49 Identity = 102/196 (52.04%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A G P AIYS+FLQRGYDQ++HDV + +LPV FA+DR GLVGADG TH GAFD++FM C+PN+V+MAPSDE E M+ T PS R+PRGNG+GA + + T LEIGKG I +G+++AIL +G++++ + AA + ++ TVAD RF KPLD +LI +LA H++L+TVEE ++ GG GS Sbjct: 380 MAIGGYNPIVAIYSTFLQRGYDQLIHDVAIMELPVMFAIDRGGLVGADGQTHQGAFDLSFMRCIPNIVIMAPSDENECRQMLYTGHK-HQGPSAVRYPRGNGLGAEI--QKEMTALEIGKGIIRRQGEKIAILNFGTMLEYALEAA-----EKLNATVADMRFVKPLDEELILELAANHDVLVTVEENAIAGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ENTS8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dxs PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49 Identity = 102/196 (52.04%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P+MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G++VA+L +G+++ + AA L + T+ D RF KPLD LI +LA HE L+T+EE +V GG GS Sbjct: 380 LAIGGYKPVVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPDMVIMTPSDENECRQMLFTGYHYNDGPSAVRYPRGNALGVTLEPLQK---LPIGKGVVKRHGEKVALLNFGTLLPEATQAAEAL-----NATLVDMRFVKPLDEALIMELAGRHEALVTIEENAVMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CUPTR (1-deoxy-D-xylulose-5-phosphate synthase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dxs PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.138e-49 Identity = 108/201 (53.73%), Postives = 137/201 (68.16%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA EG+KP AIYS+FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADG TH GA+DI ++ C+PNM+VM PSDE E ++ T A D P+ R+PRG+G GA + + P+ +GKG + E G RV L +GS+VQ + AA L TVAD RF KPLD L+++LA +H+ L+TVEEGSV GG GS Sbjct: 380 LACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLL-TTAFQQDCPTAVRYPRGSGPGAAIAADL--APVPVGKGVVRREAGARAGHRVGFLAFGSMVQPALGAAEAL-----DATVADMRFVKPLDVALVKRLAADHDYLVTVEEGSVMGGAGS 572
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_VIBSL (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio splendidus (strain LGP32) GN=dxs PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.486e-49 Identity = 104/198 (52.53%), Postives = 136/198 (68.69%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME------GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGG 576 +A G KP AIYS+FLQRGYDQ++HDV + LPV FA+DRAGLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T PS R+PRGNG+G + ++ T LEIGKGRI+ E G +VAIL +G+ ++ + A+ I TVAD RF KPLD LI+QLA +H++L+T+EE ++ G Sbjct: 380 MAIAGDKPIVAIYSTFLQRGYDQLIHDVAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHQ-HTGPSAVRYPRGNGMGTEI--QSEFTALEIGKGRIVRESKKAKDGSKVAILSFGTFLESALQTADA-----IDATVADMRFVKPLDEALIKQLAADHDVLVTIEENAIAG 569
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PROMH (1-deoxy-D-xylulose-5-phosphate synthase OS=Proteus mirabilis (strain HI4320) GN=dxs PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.486e-49 Identity = 101/196 (51.53%), Postives = 136/196 (69.39%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DR G+VGADG TH GAFD++F+ C+PNM++MAPSDE E M+ T + P R+PRG+G+GA L P ++ L IGKG I +G +AIL +G+++ + + A + + TVAD RF KPLD +LI LA +H+IL+T+EE ++ GG GS Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDRGGIVGADGQTHQGAFDLSFLRCIPNMIIMAPSDENECRQMLHTGYHYQEGPVAVRYPRGSGVGAPLQPLSE---LPIGKGIIRRQGKSIAILNFGTLLPEALDVA-----EKLDATVADMRFIKPLDKELILSLAKQHDILVTLEENAIMGGAGS 567 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |