CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SHEAM (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dxs PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.633e-49 Identity = 101/195 (51.79%), Postives = 134/195 (68.72%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A EG K AIYSSFLQRGYDQ++HDV LQ+LPV FA+DR G+VGADG TH GAFD+++M C+PNMV+MAPSDE E M T ++ PS R+PRG+ GA + T L IGKG + +G ++AIL +G+ LAA + ++ ++ TVAD RF KPLD L+ +LA H++L+TVEE ++ GG GS Sbjct: 381 ACEGYKAVVAIYSSFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGATHQGAFDLSYMRCIPNMVIMAPSDENECRQMFYTGYCYNEGPSAVRYPRGSATGA--EQIEEMTALPIGKGVMRRQGQKIAILNFGT-----TLAAALTAAESLNATVADMRFVKPLDEALLLELAASHDVLVTVEENAIMGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PROM1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain NATL1A) GN=dxs PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.633e-49 Identity = 97/196 (49.49%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 +A EG+KP AIYS+FLQR YDQ++HD+ +Q LPV F +DRAG+VGADGPTH G +DI+++ C+PN VMAP DE+EL M+ T + + PS R PRG+G GA L LEIGK + EG+ + I+GYGS+V + A +LK ++ TV +ARF +PLD D I + A ++T+EEG+ +GGFGS Sbjct: 380 MACEGIKPVVAIYSTFLQRAYDQLIHDIGIQNLPVTFVLDRAGIVGADGPTHQGQYDISYLRCIPNFTVMAPKDESELQQMLVT-CINHNGPSALRIPRGSGEGAALMEEG-WESLEIGKAETIEEGENLLIIGYGSMVFPAIKTAAILKEFGVNCTVINARFIRPLDEDTIHEAAKRIGKVVTMEEGTLLGGFGS 573
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MAGSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetococcus sp. (strain MC-1) GN=dxs PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.633e-49 Identity = 103/196 (52.55%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA+EG+ P AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH GA+D++++ +P M +MAP+DE EL HM+ TA + ++P R+PRG +G LPP LEIG+GR L +G+ AIL G V + AA +L+ Q ISV+V DARF KPLD L++++A H +++ VEE +V GGFGS Sbjct: 376 LATEGILPVVAIYSTFMQRAYDQLIHDVALQDLPVIFALDRAGLVGADGATHAGAYDLSYLRTVPGMTIMAPADENELRHMLHTAVAL-NKPVALRYPRGTALG--LPPEPPHV-LEIGRGRTLRKGEHAAILAVGQPVHPALEAAAILEQQGISVSVYDARFVKPLDQRLLQEVA-MHGVVLVVEENAVQGGFGS 566
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SHIDS (1-deoxy-D-xylulose-5-phosphate synthase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dxs PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.258e-48 Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGTVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDETLILEMAASHEALVTVEENAIMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PROM5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9515) GN=dxs PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.258e-48 Identity = 97/196 (49.49%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 ++ +G+KP AIYS+FLQR +DQ++HDV +Q LPV F +DRAG+VGADGPTH G +DI++M +PN V+MAP DEAEL M+ T ++ P+ R PRG+G G V + PL IG+G IL +G+ + I+ YGS+V + + +LK ++IS V +ARF +PLD DLI LAN+ + ++T+EEG+ +GGFGS Sbjct: 380 MSCDGLKPVVAIYSTFLQRAFDQLIHDVGIQNLPVSFVLDRAGIVGADGPTHQGQYDISYMRSIPNFVLMAPKDEAELQRMLIT-SINHKGPTALRIPRGSGRG-VAVMDEGWEPLNIGEGEILEDGEDILIVAYGSMVSSAIETSKLLKDKNISPCVINARFVRPLDKDLILPLANKIKKVVTMEEGTLIGGFGS 573
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_NITEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrosomonas eutropha (strain C91) GN=dxs PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.258e-48 Identity = 98/195 (50.26%), Postives = 135/195 (69.23%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A EG+KP AIYS+FLQR YDQ++HDV +Q LPV FA+DRAGLVGADGPTH G+FD++++ C+PN+ VM P+DE E M+ TA + D P+ R+PRG G G + + PL GKG I +G R+A+L +GS++ C+ A + ++ TV + RF KPLD +L+ LA EHE+L+TVEE ++ GG GS Sbjct: 374 ACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLSYLRCIPNITVMMPADENECRQMLYTAFQL-DTPTAVRYPRGTGPGVQIKQEMQIVPL--GKGEIRRQGTRIALLAFGSMLSPCLEAGD-----ELDATVVNMRFVKPLDQELVMTLAAEHELLVTVEENTIMGGAGS 560
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_KLEP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dxs PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.258e-48 Identity = 101/196 (51.53%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA KP AIYS+FLQR YDQV+HDV +QKLPV F +DRAG+VGADG TH GAFD++F+ C+P+MVVM PSDE E M+ T D P R+PRG+G GA L P L IGKG + +G+++AIL +G+++ + A+ L + T+ D RF KPLDT LI QLA EH+ L+T+EE ++ GG GS Sbjct: 380 LAIGDYKPVVAIYSTFLQRAYDQVIHDVAIQKLPVLFTIDRAGIVGADGQTHQGAFDLSFLRCIPDMVVMTPSDENECRQMLYTGYHYSDGPCAVRYPRGSGTGATLEPL---ASLPIGKGVVKRQGEKIAILNFGTLLPEAAAVADKL-----NATLVDMRFVKPLDTALILQLAGEHDALVTLEENAIMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SHEDO (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dxs PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.643e-48 Identity = 98/195 (50.26%), Postives = 134/195 (68.72%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A EG K AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADG TH GAFD++FM C+PN+V+MAP+DE E M+ T D P+ R+PRG GA + T L IGKGR+ +G ++AIL +G+ LA+ + ++ + +VAD RF KPLD DL+ LA EH++++T+EE ++ GG GS Sbjct: 381 ACEGFKSVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGATHQGAFDLSFMRCIPNLVIMAPADENECRQMLYTGYRYQDGPTAVRYPRGFATGA--EQIEQMTALPIGKGRVCRQGKKIAILNFGT-----TLASALEVAEQLDASVADMRFIKPLDVDLLHTLALEHDVIVTIEENAIMGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PSEA6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dxs PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.643e-48 Identity = 99/192 (51.56%), Postives = 132/192 (68.75%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGG 576 LA EG AIYS+FLQR YDQ++HDV LQ LPV FA+DRAGLVGADGPTH GAFDI F+ C+PNMV+M P+DE E M+ T + ++P+ R+PRG+G G + P+N LEIGK R + +G++VAIL +G ++ AA +L + TV D RF KPLDT+ + +A HE+LIT+E+G+ G Sbjct: 380 LAKEGQNAVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGPTHQGAFDIPFLRCIPNMVIMTPADENECRQMLYTGHKL-NKPAAVRYPRGSGTG--VKPDNTMQALEIGKSRTIRQGEKVAILNFGVLLPYAEKAAEVL-----NATVIDMRFVKPLDTEAVANVAKNHELLITLEDGATTG 563
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CITK8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=dxs PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.643e-48 Identity = 97/196 (49.49%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M P DE E M+ T +D P+ R+PRGN +G L P K L IGKG + +G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE+LIT+EE ++ GG GS Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVMFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPGDENECRQMLYTGYHYNDGPTAVRYPRGNAVGVELTPLEK---LPIGKGLVKRQGEKLAILNFGTLLPEAAKVA-----ESLNATLVDMRFVKPLDETLILEMAERHEVLITLEENAIMGGAGS 567 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |