CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ECODH (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli (strain K12 / DH10B) GN=dxs PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.803e-48 Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ECOBW (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli (strain K12 / BW2952) GN=dxs PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.803e-48 Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ECO81 (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli O81 (strain ED1a) GN=dxs PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.803e-48 Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ECO7I (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=dxs PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.803e-48 Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ECO45 (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=dxs PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.803e-48 Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ECO27 (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=dxs PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.803e-48 Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ECOLU (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=dxs PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.660e-48 Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E M+ T +D PS R+PRGN +G L P K L IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS Sbjct: 380 LAIGGYKPVVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_BURXL (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia xenovorans (strain LB400) GN=dxs PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.660e-48 Identity = 105/201 (52.24%), Postives = 136/201 (67.66%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA+EG+KP AIYS+FLQR YDQ++HDV LQ LPV FA+DRAGLVGADG TH GA+D+ F+ C+PNM VMA SDE E M+ T A+ P+ R+PRG G G + + T L +GKG I E G R+AIL +G++V A ++ ++ + TVA+ RF KPLD DL+RQLA H+ ++TVEEG V GG GS Sbjct: 375 LAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYT-ALQQPNPTAVRYPRGAGTG--VATIKQMTALPLGKGEIRRETSQPAGKRIAILAFGTMV-----APSLAAAEQLDATVANMRFVKPLDADLVRQLAETHDAIVTVEEGCVMGGAGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_BORPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella parapertussis GN=dxs PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.660e-48 Identity = 106/196 (54.08%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA EG KP AIYS+FLQRGYDQ+VHDV LQ L V FA+DRAGLVGADG TH G +DI F+ C+PNMVV APSDE+E +++T P+ R+PRG G GA + PL GKG + EG R+AILG+G++VQ + AA I TVAD RF KPLD +L+ +LA H+ L+TVEE ++ GG GS Sbjct: 376 LACEGQKPVVAIYSTFLQRGYDQLVHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVVAAPSDESEARLLLST-CYEHPGPASVRYPRGAGCGAAVGEGLATVPL--GKGLVRREGRRIAILGFGTLVQAALGAAG-----QIDATVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGS 563
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_BORBR (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella bronchiseptica GN=dxs PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.660e-48 Identity = 106/196 (54.08%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA EG KP AIYS+FLQRGYDQ+VHDV LQ L V FA+DRAGLVGADG TH G +DI F+ C+PNMVV APSDE+E +++T P+ R+PRG G GA + PL GKG + EG R+AILG+G++VQ + AA I TVAD RF KPLD +L+ +LA H+ L+TVEE ++ GG GS Sbjct: 376 LACEGQKPVVAIYSTFLQRGYDQLVHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVVAAPSDESEARLLLST-CYEHPGPASVRYPRGAGCGAAVGEGLATVPL--GKGLVRREGRRIAILGFGTLVQAALGAAG-----QIDATVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGS 563 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |