CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PORGI (1-deoxy-D-xylulose-5-phosphate synthase OS=Porphyromonas gingivalis GN=dxs PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39 Identity = 85/196 (43.37%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA EG+ PFC IYSSF+QRGYDQV+HDV L V +DRAGLVG DG TH G FD+ F+ C+P++VV +P +E EL +++ TA D P R+PRG G+ + N +EI +GR L EG+ +A L G + L + +S D F KPLD +++ +A + + +I+VE+G + GGFGS Sbjct: 386 LAKEGLIPFCNIYSSFIQRGYDQVIHDVALSGSHVVICLDRAGLVGEDGATHHGVFDMAFLRCVPDIVVASPLNEHELRNLMLTAYKGYDGPMVIRYPRGKGV--LTDWRNTPRLVEIARGRCLTEGEAIAFLSIGPIGNMVQKVVERLAEKGVSAAHYDMVFLKPLDEEMLHGIAKKFDTIISVEDGCIQGGFGS 579
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PORG3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dxs PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39 Identity = 85/196 (43.37%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA EG+ PFC IYSSF+QRGYDQV+HDV L V +DRAGLVG DG TH G FD+ F+ C+P++VV +P +E EL +++ TA D P R+PRG G+ + N +EI +GR L EG+ +A L G + L + +S D F KPLD +++ +A + + +I+VE+G + GGFGS Sbjct: 386 LAKEGLIPFCNIYSSFIQRGYDQVIHDVALSGSHVVICLDRAGLVGEDGATHHGVFDMAFLRCVPDIVVASPLNEHELRNLMLTAYKGYDGPMVIRYPRGKGV--LTDWRNTPRLVEIARGRCLTEGEAIAFLSIGPIGNMVQKVVERLAEKGVSAAHYDMVFLKPLDEEMLHGIAKKFDTIISVEDGCIQGGFGS 579
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens (strain SM101 / Type A) GN=dxs PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39 Identity = 85/196 (43.37%), Postives = 127/196 (64.80%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFG 582 +A+EG+KPF A+YS+FLQR YDQV+HDV +Q LPV +DRAGLVG DG TH G FDI+F+S +PNM ++AP E M ++ A + P R+PRG I L P +K +E GK + EG+++AI+ G +VQ ++AA +K + +I + + +A F KP+D +L+ L+ + ++T+E+ GGFG Sbjct: 375 MAAEGLKPFFAVYSTFLQRAYDQVLHDVCIQNLPVTLCLDRAGLVGEDGETHQGIFDISFLSPMPNMTIVAPKCIDE-MEVILKWASNFNAPLAIRYPRGGDIDVNLKPLSK---IEYGKWEKVQEGEKIAIVATGKMVQHAMIAAQKIKEEKNIDILIINATFIKPIDKELLNSLSKDGFKIVTIEDNIKKGGFG 566
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MARMS (1-deoxy-D-xylulose-5-phosphate synthase OS=Marinomonas sp. (strain MWYL1) GN=dxs PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.013e-38 Identity = 89/197 (45.18%), Postives = 123/197 (62.44%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR-VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A +G+KP AIYS+FLQR YDQ++HDV LQ L V FA+DRAGLVG DGPTH G +D++++ C+PNMVVMAPSDE E M+ T P+ R+PRG G G + + + L+IGK R L G + I G+G + AAN L T+ D RF KP+D + + + ++++TVEE ++ GG GS Sbjct: 383 MACDGIKPVVAIYSTFLQRAYDQLIHDVALQNLDVLFAIDRAGLVGEDGPTHAGVYDLSYLRCIPNMVVMAPSDEDECRKMLQTGYEYKG-PAAVRYPRGTGQGVDI--ESTLSTLKIGKSRTLRTGQSGIVICGFGRPTYDALKAANTL-----DATLLDMRFVKPIDEETL-LTHRDAKLIVTVEENAIMGGAGS 570
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MACCJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Macrococcus caseolyticus (strain JCSC5402) GN=dxs PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.013e-38 Identity = 86/198 (43.43%), Postives = 121/198 (61.11%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLP--PNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A+ G+KP+ AIYS+FLQR YDQ++HDVD Q L V F +DR+GLVGADG TH G FDI+F++ +PNM VM P DE E H++ A + P R+PRGNG G + PN+ + G +L EG V +L +G ++ L + +S+ V +ARF KPLD + A + ++TVEE + GGFG+ Sbjct: 376 MAANGMKPYVAIYSTFLQRAYDQMLHDVDRQNLHVVFGIDRSGLVGADGETHQGVFDISFLTHMPNMTVMMPKDENEAYHLLYNAFYEYEGPIAIRYPRGNGYGVKIDSIPNS----VVRGDWEVLHEGTDVIVLSFGPTLKLIEAVREELLKEGVSIEVVNARFIKPLDYHYLAAAAKRNIPVLTVEEAMLSGGFGA 569
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOD6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium difficile (strain 630) GN=dxs PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.013e-38 Identity = 85/196 (43.37%), Postives = 125/196 (63.78%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+KP+ A+YSSFLQR YDQV+HDV + K PV F +DRAGLVG DG TH G FD+++++ +PN+VVMAP D E M ++ ++ D P R+PRG+ L G + +GK +L +G IL GS+V+ + A +L + I+ T+ +ARF KP+D +++ L H+ ++T+E+ V GGFGS Sbjct: 376 LAKNGMKPYFAVYSSFLQRAYDQVIHDVCITKKPVTFLIDRAGLVGNDGETHHGMFDLSYLNSIPNIVVMAPKDTRE-MELMMDLSLKLDCPLAIRYPRGSSY--YLDKGEYG-EIVLGKYEVLDDGQDTVILCIGSMVKHALEAKEILSREGINPTIVNARFLKPIDEGMLKALLKNHKNVVTIEDNIVTGGFGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_RHOBA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopirellula baltica GN=dxs PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.629e-38 Identity = 82/194 (42.27%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 13 GVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSLY 591 G++P IYS+FLQR YDQ+ +V LQ LPV F MDRAGL DGPTH G +DI +M PN+V+MAP EL M+ A + D PS R+P+ + + A P P+EIGK + EG I+ YG++++Q + AA L+ ++ + V +ARF KP+D +++ + ++ ++T+EEG+ VGGFGS + Sbjct: 388 GMRPIVDIYSTFLQRSYDQIFQEVALQDLPVVFMMDRAGLTAPDGPTHHGVYDIGYMRLFPNLVLMAPGYAEELSMMLDKALTL-DHPSGIRYPKASALEATHTP----APIEIGKAEWIREGTDGTIVAYGAMLEQAIAAAEQLEG-ELEIGVVNARFVKPIDAEMVHKTLSDGRFVVTLEEGTRVGGFGSAF 575
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_LISMO (1-deoxy-D-xylulose-5-phosphate synthase OS=Listeria monocytogenes GN=dxs PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.629e-38 Identity = 85/196 (43.37%), Postives = 123/196 (62.76%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA++G+KPF AIYS+FLQR YDQ+VHDV QKL V +DRAGLVGADG TH G FDI+F++ +PNM + P DE E ++ TA +D P R+PRG G + +N T + IG+ +++ IL +G ++ + AA L+ + V V +AR+ KPLD L+ ++ + ++TVEE + GGFG+ Sbjct: 352 LATQGMKPFLAIYSTFLQRAYDQLVHDVCRQKLNVVIGIDRAGLVGADGETHQGIFDISFLNSIPNMTISMPKDEVEARQLMDTAFSYNDGPFAIRYPRGEAPGVQVVESN--TLIPIGQWETIIQPLDAVILTFGPTIELALKAAEQLEIEGYRVGVINARYIKPLDEALLHKILKQKIPILTVEESLLKGGFGA 545
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_DESHY (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain Y51) GN=dxs PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.629e-38 Identity = 88/196 (44.90%), Postives = 120/196 (61.22%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+KP +IYS+F QR YDQV+HDV L V A+DRAG+VG DGPTH G FDI+F+ +PN+V MAP DE EL HM+ T+ +D P R+PR G G L + P +GK IL EG + ++G G +V C+ AA L+ + + TV + R+ PLD + I + A + +ITVE+ + GG GS Sbjct: 376 LAFGGMKPVVSIYSTFYQRAYDQVLHDVCLPHANVVMAIDRAGVVGDDGPTHHGVFDISFLRVIPNLVFMAPKDENELRHMLYTSLQLDG-PVALRYPRSVGQGVELTEELRELP--VGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_DESHD (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dxs PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.629e-38 Identity = 88/196 (44.90%), Postives = 120/196 (61.22%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+KP +IYS+F QR YDQV+HDV L V A+DRAG+VG DGPTH G FDI+F+ +PN+V MAP DE EL HM+ T+ +D P R+PR G G L + P +GK IL EG + ++G G +V C+ AA L+ + + TV + R+ PLD + I + A + +ITVE+ + GG GS Sbjct: 376 LAFGGMKPVVSIYSTFYQRAYDQVLHDVCLPHANVVMAIDRAGVVGDDGPTHHGVFDISFLRVIPNLVFMAPKDENELRHMLYTSLQLDG-PVALRYPRSVGQGVELTEELRELP--VGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGS 568 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |