CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_BACTN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides thetaiotaomicron GN=dxs PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.485e-38 Identity = 81/200 (40.50%), Postives = 124/200 (62.00%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQD-ISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A +G++PFC IYSSF+QR YD ++HDV +Q LPV +DRAGLVG DGPTH GAFD+ ++ +PN+ + +P +E EL ++ TA + D P R+PRG G+ + PLE +GKGR L +G +A++ G + + A +S+ S+ D RF KPLD +L+ ++ ++T+E+G++ GG GS Sbjct: 387 MAKDGLQPFCNIYSSFMQRAYDNIIHDVAIQNLPVVLCLDRAGLVGEDGPTHHGAFDMAYLRPIPNLTIASPMNEHELRRLMYTAQLPDKGPFVLRYPRGRGVLV-----DWKCPLEEIPVGKGRKLKDGKDIAVISIGPIGNKARSAIARAESESGRSIAHYDLRFLKPLDEELLHEVGRTFRHIVTIEDGTIQGGMGS 581
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_SULDN (1-deoxy-D-xylulose-5-phosphate synthase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=dxs PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 7.650e-38 Identity = 86/198 (43.43%), Postives = 122/198 (61.62%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILM--EGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGS 585 LA EG KPFC IYS+FLQRGYDQV+HD L LPV FA+DRAG+VG DG TH G FD++F+ +PNM + AP DE +A AA P R+PRG+ LP + +P E+ K ++L +GD V +GYG+ V + + +L+ + +++ D RF KPLD +++R +A +H + I + +GG GS Sbjct: 364 LAKEGFKPFCTIYSTFLQRGYDQVIHDTCLMNLPVVFALDRAGIVGEDGETHQGVFDVSFLRAIPNMTLFAPRDEKSFHQAMAFAAQY-QFPCSLRYPRGSFTQTSLP---ESSPFELAKSQLLQSNKGD-VLFIGYGNGVGRAYETSKLLEEK---ISILDLRFIKPLDKEMLRDMATKHNKWFIFSDSAKMGGVGS 553
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_BACV8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dxs PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.704e-37 Identity = 83/197 (42.13%), Postives = 122/197 (61.93%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A +G+ PFC IYSSF+QR YD V+HD+ +QKL V +DRAGLVG DGPTH GAFD+ +M +PN++V +P +E EL ++ TA + D P R+PRG G+++ +EIGKGR L EG +A++ G + Q A + + S+ D RF KPLD ++ ++ + ++TVE+G + GG GS Sbjct: 387 MAKDGLLPFCNIYSSFMQRAYDNVIHDIAIQKLNVVLCLDRAGLVGEDGPTHHGAFDLAYMRPIPNLIVASPYNEHELRCLMYTAQLPDKGPFVIRYPRGR--GSLVDWKCPMQEIEIGKGRKLKEGKDIAVITLGPIGVQAEKAITHAEQETGKSIAHYDLRFLKPLDESMLHEIGKRFKQVVTVEDGVLKGGMGS 581
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_BACFR (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides fragilis GN=dxs PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.704e-37 Identity = 79/196 (40.31%), Postives = 122/196 (62.24%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFG 582 +A +G+ PFC IYSSF+QR YD ++HDV +QKL V F +DRAGLVG DGPTH G FD+ ++ +PN+ + +P DE EL ++ TA + D P R+PRG G+++ + +GKGR L +G+ +A++ G + + A ++ ISV D RF KPLD +L+ ++ + ++T+E+G + GG G Sbjct: 387 MAKDGLLPFCNIYSSFMQRAYDNIIHDVAIQKLNVVFCLDRAGLVGEDGPTHHGVFDMAYLRPIPNLTISSPMDEHELRRLMYTAQLPDKGPFAIRYPRGR--GSLVDWECPLEEIPVGKGRKLKDGNDLAVITIGPIGKLAARAIERAEADTGISVAHYDLRFLKPLDEELLHEVGKKFRHIVTIEDGIIKGGMG 580
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_BACFN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dxs PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.704e-37 Identity = 79/196 (40.31%), Postives = 122/196 (62.24%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFG 582 +A +G+ PFC IYSSF+QR YD ++HDV +QKL V F +DRAGLVG DGPTH G FD+ ++ +PN+ + +P DE EL ++ TA + D P R+PRG G+++ + +GKGR L +G+ +A++ G + + A ++ ISV D RF KPLD +L+ ++ + ++T+E+G + GG G Sbjct: 387 MAKDGLLPFCNIYSSFMQRAYDNIIHDVAIQKLNVVFCLDRAGLVGEDGPTHHGVFDMAYLRPIPNLTISSPMDEHELRRLMYTAQLPDKGPFAIRYPRGR--GSLVDWECPLEEIPVGKGRKLKDGNDLAVITIGPIGKLAARAIERAEADTGISVAHYDLRFLKPLDEELLHEVGKKFRHIVTIEDGIIKGGMG 580
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOK5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dxs PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.226e-37 Identity = 85/196 (43.37%), Postives = 124/196 (63.27%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A EG+KP A+YS+FLQR YDQ++HD+ +QKLPV FA+DRAG+VG DG TH G FD+++++ +PNM VM+P AEL HM+ A+ + P R+PRG G L P E G+ ++ ++A++ G +V+ VLAA L+ I V V A F KPLD ++++L E +IT+E+ + GG GS Sbjct: 376 MAVEGLKPVFAVYSTFLQRSYDQLLHDICIQKLPVVFAVDRAGIVGDDGETHQGIFDLSYLTEMPNMTVMSPKCMAELTHMLKW-ALNQNCPIAIRYPRG-GDNVYLTPLE---DFEFGRWEYILNKGKIALVAQGRMVEHAVLAAEKLEQMGILVRVISACFIKPLDKVMLKKLIEEDVTIITIEDNIIRGGLGS 566
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOK1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=dxs PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.226e-37 Identity = 85/196 (43.37%), Postives = 124/196 (63.27%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A EG+KP A+YS+FLQR YDQ++HD+ +QKLPV FA+DRAG+VG DG TH G FD+++++ +PNM VM+P AEL HM+ A+ + P R+PRG G L P E G+ ++ ++A++ G +V+ VLAA L+ I V V A F KPLD ++++L E +IT+E+ + GG GS Sbjct: 376 MAVEGLKPVFAVYSTFLQRSYDQLLHDICIQKLPVVFAVDRAGIVGDDGETHQGIFDLSYLTEMPNMTVMSPKCMAELTHMLKW-ALNQNCPIAIRYPRG-GDNVYLTPLE---DFEFGRWEYILNKGKIALVAQGRMVEHAVLAAEKLEQMGILVRVISACFIKPLDKVMLKKLIEEDVTIITIEDNIIRGGLGS 566
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium acetobutylicum GN=dxs PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.476e-37 Identity = 86/198 (43.43%), Postives = 122/198 (61.62%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPR-GNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSL 588 LA+ G KP A+YS+FLQR YDQV+HDV +QKLPV FA+DRAG+VG DG TH G FDI+++S +PNM +MAP EL + + AV + P R+P+ GN I VL P + GK IL +G VAI+ G +VQ+ ++ + L I + +A F KP+D D + + A ++ + +E+ + GG GSL Sbjct: 375 LAATGYKPVFAVYSTFLQRAYDQVLHDVCIQKLPVVFAIDRAGIVGEDGETHQGVFDISYLSSIPNMTIMAPKCVEEL-NYIMNWAVKQNYPIAVRYPKGGNDISDVLAPLKE---FRHGKWEILKDGKDVAIVAVGKMVQRAMVVRDELLKYGIDCAIINATFIKPIDKDTLNRFARDNYKFVVIEDNVLHGGIGSL 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CHRSD (1-deoxy-D-xylulose-5-phosphate synthase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dxs PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.476e-37 Identity = 86/196 (43.88%), Postives = 121/196 (61.73%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A E +KP AIYS+FLQRGYDQ++HDV +Q L V FA+DRAG+VG DGPTH GA D++F+ C+P M+V+AP+DEAE M+ +AA P+ R+PRG G G + N + P+ + R VA+L +GS+ A L + +++ R KPLD + I A +H +L+T+EE V GG GS Sbjct: 405 MACEAMKPVVAIYSTFLQRGYDQLIHDVAVQALDVTFAIDRAGVVGEDGPTHHGALDLSFLRCIPGMIVLAPADEAECRAML-SAAYHHPGPAAVRYPRGTGPGTQVASNLEALPIGEAETRRSGREGGVALLAFGSMNGPAGEVAERLDATHLNM-----RSVKPLDREAILAAARDHRLLVTLEESVVAGGAGS 594
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_NITSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitratiruptor sp. (strain SB155-2) GN=dxs PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.214e-36 Identity = 85/197 (43.15%), Postives = 122/197 (61.93%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGD-RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGS 585 LA EG KPF AIYS+FLQRGYDQV+HD+ L + V FA+DRAG+VG DG TH GAFD++++ +PNM + AP D L + V A DRP FR+PRG+ +L + P E+GK +L+E + V +GYG+ V + A +K D V++ D RF KPLD +L+++L+ + + + + +GG S Sbjct: 362 LAKEGFKPFVAIYSTFLQRGYDQVIHDIALMDVGVAFAIDRAGIVGEDGETHQGAFDVSYLRPIPNMHLFAPRDPKTLEYAVEFAKDF-DRPCAFRYPRGS---FILDDEFEAKPFELGKAELLVESEGDVLFVGYGNGVGR---AYETMKHIDEPVSLLDLRFVKPLDVELLQELSKRYRQWFVFSDSAKLGGVAS 551 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |