CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_EXIS2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dxs PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.198e-36 Identity = 88/195 (45.13%), Postives = 121/195 (62.05%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 A++G+KP +IYS+F QR YDQ+VHDV Q L V F +DR+GLVGADG TH G FDI FM +PN+ ++ DE EL H++ +AV + P RFPRG GIG +P + + + + EG VAI+ +G VQ + A +L+ D+SV V +AR KPLD ++ L E L+T+EE + GGFGS Sbjct: 378 ATQGMKPVVSIYSTFFQRAYDQLVHDVARQNLDVTFTIDRSGLVGADGETHQGVFDIAFMRHVPNIRIVMAKDENELQHLL-YSAVKYEGPIAVRFPRGEGIG--VPMDETLHEISLDTWDVEREGTDVAIMAFGPQVQDALKIAELLEG-DVSVRVINARTIKPLDEKMLNALYAEGIPLVTLEEAVLKGGFGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_METI4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylacidiphilum infernorum (isolate V4) GN=dxs PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.482e-36 Identity = 80/197 (40.61%), Postives = 117/197 (59.39%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSL 588 +A++G KP+CAIYS+FLQR YD ++HDV LQKLPV F +DR GL G DGPTH G FD+ ++ +PN+ +M P DE EL M+ T A+ P R+PRG+G G + + P IG+ ++ G VAI G +V+ A L+ S + + R KP D + A ++++++E+ + GGFGSL Sbjct: 374 MATKGFKPYCAIYSTFLQRAYDPIIHDVCLQKLPVVFCLDRGGLSGDDGPTHHGLFDVAYLRTVPNITIMHPKDEDELADMLFT-AMHHPGPVAIRYPRGSGSGVAVKERPELIP--IGRAEVIKHGRDVAIFSLGIMVEMGKELAQKLEECGYSAALINPRTVKPFDRGTLEFFARSVDLIVSIEDHVLAGGFGSL 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CAMFF (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=dxs PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 9.352e-36 Identity = 83/198 (41.92%), Postives = 117/198 (59.09%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGD-RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGSL 588 +A EG KP+ AIYS+F+QR YDQV+HD + +LPV F MDRAG+VG DG TH GAFDI+F++ +PN+ ++AP DE +++ + D P R+PRGN +L K + KG IL GD VA +GYG+ V + V A K + T+ D F KPLD +L+ Q+A H + + + GG G + Sbjct: 362 MAKEGFKPYIAIYSTFMQRAYDQVIHDCAIMRLPVVFCMDRAGIVGEDGETHQGAFDISFLNAIPNLNLVAPRDEESFKNIMEFSYAFDS-PLAIRYPRGN---FILNNEYKSQKTALAKGEILENGDGSVAFIGYGNGVGKAVQTA---KKLNFKPTIVDLVFAKPLDKELLLQIAKTHNKWYVFSDSAKRGGIGEI 552
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_THET8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dxs PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.083e-35 Identity = 84/195 (43.08%), Postives = 116/195 (59.49%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGS 585 LA G+KP AIYS+FLQR YDQV+HDV ++ LPV FA+DRAG+VGADG TH G FDI ++ +PN+ + AP D EL M+ A + P R+PR N A P + GK +L EG IL +G ++ + AA D V V +ARF KPLD +++R+L + +++L + +GGFGS Sbjct: 370 LALRGMKPIVAIYSTFLQRAYDQVIHDVAIENLPVVFAIDRAGIVGADGATHHGVFDIAYLRTVPNLQIAAPKDALELRAMLKKALEVGG-PVAIRYPRDNVERA---PEGVWPEIAWGKWEVLKEGTEAYILAFGKTLRYALEAA----GDDPRVGVVNARFLKPLDREMLREL-SRYKLLTVEDHQKMGGFGS 555
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_THEMA (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga maritima GN=dxs PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.721e-35 Identity = 80/196 (40.82%), Postives = 120/196 (61.22%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGS 585 L G+KP AIYS+FLQR YDQ++HDV LQ PV FA+DR+G+VG DGPTH G FDI ++ +PNM +++PS E ++ + T D P R+P+ + G V +++G +IL G AI+ G+++ N + + VTV +A KPLDT +++++A +H+++ITVEE +GGFGS Sbjct: 360 LGLHGMKPVVAIYSTFLQRAYDQIIHDVALQNAPVLFAIDRSGVVGEDGPTHHGLFDINYLLPVPNMKIISPSSPEEFVNSLYTVLKHLDGPVAIRYPKESFYGEVESLLENMKEIDLG-WKILKRGREAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTAVLKEIARDHDLIITVEEAMKIGGFGS 547
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOBA (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=dxs PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.721e-35 Identity = 76/195 (38.97%), Postives = 120/195 (61.54%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFG 582 +A+ G+KP A+YS+FLQRG+DQV+HDV +Q LPV FA+DRAG+VG DG TH G D++++S +PNM ++AP E+ M+ A+ + P R+PRG I L + + GK ++ EG ++ I+ G ++Q +LA +LK + I + +A F KP+D L+ L + ++T+E+ + GG G Sbjct: 375 MAANGLKPVFAVYSTFLQRGFDQVIHDVCIQDLPVTFAIDRAGIVGDDGETHQGIMDVSYLSMMPNMTIVAPKCTEEIPSMLRW-AIKKNSPVAIRYPRGKDIVCNLDALQE---ISYGKWEVVSEGKKICIIASGRMLQHALLAKEILKEKGIDPKIVNATFIKPIDKCLLENLKEDGYDILTIEDNIICGGLG 565
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOBB (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=dxs PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.554e-35 Identity = 77/195 (39.49%), Postives = 118/195 (60.51%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFG 582 +A+ G+KP A+YS+FLQRG+DQV+HDV +Q LPV FA+DRAG+VG DG TH G D++++S +PNM ++AP E+ M+ A+ + P R+PRG I L + + GK ++ EG R+ I+ G ++Q LA +LK I + +A F KP+D L+ L + ++T+E+ + GG G Sbjct: 375 MAANGLKPVFAVYSTFLQRGFDQVIHDVCIQDLPVTFAIDRAGIVGDDGETHQGIMDVSYLSMMPNMTIVAPKCTEEIPSMLRW-AIKKNSPVAIRYPRGKDIVCNLHALQE---ISYGKWEVVSEGKRICIIASGRMLQHAFLAKEILKENGIDPKIVNATFIKPIDKCLLENLKEDGYDILTIEDNIICGGLG 565
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOTE (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium tetani GN=dxs PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 4.641e-35 Identity = 75/196 (38.27%), Postives = 125/196 (63.78%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A+ G++P ++YS+FLQR YDQV+HDV +Q LPV FA+DRAGLVG DG TH G FD++++S +PNM +MAP EL M+ A+ + P R+P+G + P N + GK +L + +++I+ G +V++ LK ++I + + +A F KP+D +++ ++ +E + +IT+E+ + GGFG+ Sbjct: 376 MATAGLRPVFSVYSTFLQRAYDQVLHDVCIQNLPVVFAIDRAGLVGEDGETHQGVFDMSYLSHMPNMTIMAPKCVEELEFML-NWALSQESPIAIRYPKGESRLNLKPIKN----FQKGKWEVLEDKGKISIIATGRMVEKAFNVKETLKERNIDIGLINATFVKPIDKEMLNKIIDEEKTIITLEDNVILGGFGN 566
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOPH (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dxs PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.641e-35 Identity = 77/195 (39.49%), Postives = 116/195 (59.49%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFG 582 LA+ G KP A+YS+FLQR YDQ++HDV + KLPV FA+DRAG+VG DG TH G FD++++S +P + V+AP + E M+ + D P R+P+ A L + + GKG ++ + +A++ GS+V+ VL L + T+ +ARF PLD +++ QL H + +T+EE GGFG Sbjct: 377 LAAAGFKPVVAVYSTFLQRAYDQILHDVCVGKLPVVFALDRAGIVGNDGETHQGMFDLSYLSHMPGLTVIAPKNSWEFERML-EYCIDFDGPIAIRYPKNT---AYLGLEDHKKEIIYGKGELIASEEEIALIAIGSMVETAVLVREHLHKLGLKATLVNARFISPLDEEMLHQLTKSHTLFVTMEENVKRGGFG 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLONN (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium novyi (strain NT) GN=dxs PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.641e-35 Identity = 78/195 (40.00%), Postives = 123/195 (63.08%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFG 582 +A G+KP A+YS+FLQR YDQV+HDV Q LPV FA+DRAG+VG+DG TH G FD++F++ +PNM +M P E+ +M+ AA + P R+PRG G + + K T +GK +L +A++ G +V + +K+ +++TV +A F KP+D +I++L +++ +IT+E+ + GGFG Sbjct: 375 MAQSGLKPIFAVYSTFLQRAYDQVIHDVCHQNLPVVFAIDRAGIVGSDGETHQGVFDLSFLNHMPNMTIMCPKSLHEVKYMLKWAA-NQNSPVAIRYPRG---GDSIELSAK-TDYIVGKWEVLKTEGNIALIATGKMVATAIKVQEKMKAMGVNITVINACFVKPIDKSIIKKLVSKNYKIITLEDNVLSGGFG 564 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |