CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_THET2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dxs PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.062e-35 Identity = 84/195 (43.08%), Postives = 115/195 (58.97%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGS 585 LA G+KP AIYS+FLQR YDQV+HDV ++ LPV FA+DRAG+VGADG TH G FDI ++ +PN+ + AP D EL M+ A + P R+PR N A P + GK +L EG IL +G ++ + AA D V V +ARF KPLD +++R L + +++L + +GGFGS Sbjct: 370 LALRGMKPIVAIYSTFLQRAYDQVIHDVAIENLPVVFAIDRAGIVGADGATHHGVFDIAYLRTVPNLQIAAPKDALELRAMLKKALEVGG-PVAIRYPRDNVERA---PEGVWPEIAWGKWEVLKEGTEAYILAFGKTLKYALEAA----GDDPRVGVVNARFLKPLDREMLRAL-SRYKLLTVEDHQRMGGFGS 555
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_THESQ (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga sp. (strain RQ2) GN=dxs PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.062e-35 Identity = 80/196 (40.82%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGS 585 L G+KP AIYS+FLQR YDQ++HDV LQ PV FA+DR+G+VG DGPTH G FD+ ++ +PNM +++PS E + + T D P R+P+ + G V +++G +IL G AI+ G+++ N + + VTV +A KPLDT +++++A EH+++ITVEE +GGFGS Sbjct: 360 LGLHGMKPVVAIYSTFLQRAYDQIIHDVALQNAPVLFAIDRSGVVGEDGPTHHGLFDMNYLLSVPNMKIISPSSPEEFVSSLYTVLKHLDGPVAIRYPKESFYGEVEFFLENMKEIDLG-WKILKRGREAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTTVLKEIAREHDLIITVEEAMKIGGFGS 547
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_THEP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dxs PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.062e-35 Identity = 81/196 (41.33%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGS 585 L G+KP AIYS+FLQR YDQ+VHDV LQ PV FA+D++G+VG DGPTH G FDI ++ +PNM +++PS E + + T D P R+P+ + G V +++G +IL G AI+ G+++ N + + VTV +A KPLDT +++++A +H+I+ITVEE +GGFGS Sbjct: 360 LGLHGMKPVVAIYSTFLQRAYDQIVHDVALQNAPVLFAIDKSGVVGEDGPTHHGLFDINYLLPVPNMKIISPSSPEEFVSSLYTILKNLDGPVAIRYPKESFYGEVESILENMKKIDLG-WKILRRGKEAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTAVLKEIARDHDIIITVEEAMRIGGFGS 547
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PSYA2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=dxs PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.062e-35 Identity = 90/208 (43.27%), Postives = 123/208 (59.13%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKG---RILMEGD---RVAILGYGSVVQQCVLAANM-----LKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSV-GGFGS 585 +A++GVKP AIYS+FLQRGYDQ++HDV LQ L V FA+DRAGLVG DG TH G FD F+ C+PNM++ AP DE E H++ T + R+PRG G GA + IGK +L E D ++A+L +G++V AA M L + + V + R+ KPLDT L+ QL + + T+EE ++ GG GS Sbjct: 418 MATQGVKPIVAIYSTFLQRGYDQLIHDVALQNLDVMFAIDRAGLVGEDGATHAGVFDFAFLRCVPNMMIAAPKDENECYHLLNTCYEYQG-CTAVRYPRGVGTGATI--TQPAQTYNIGKAVIESVLGEKDAPKKLALLAFGTMVATAQQAAEMIAKSPLLASSCQLHVVNMRWVKPLDTTLLEQLLLQGVTHIATLEEHTIMGGAGS 622
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_HELHP (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter hepaticus GN=dxs PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.917e-35 Identity = 79/198 (39.90%), Postives = 114/198 (57.58%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGI--GAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGS 585 +A EG KPF AIYS+FLQR YDQ++HDV + LPVRF +DRAG+VG DG TH G FDI ++ +P+MV+ AP D A L VA A +D P FR+PRG+ V N +G+ +L G ++ ++GYG+ V + L ++ ++ D RF KPLD ++ ++ H I + + +GG S Sbjct: 383 IAKEGFKPFVAIYSTFLQRAYDQIIHDVGILGLPVRFCIDRAGIVGEDGETHQGLFDIAYLRSIPHMVLFAPRDNASLQQAVAFAYRYNDSPCAFRYPRGSFTLEEGVFVSNE----FVLGQAEMLKRGKKILLVGYGNGVGRAYKVYQALITEGYEPSLLDLRFVKPLDKHMLNEVFKTHTHICVFSDSYYMGGVAS 576
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CAMJD (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=dxs PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.034e-34 Identity = 82/198 (41.41%), Postives = 117/198 (59.09%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSVGGFGSL 588 +A EG KPF AIYS+FLQR YDQV+HD + L V FAMDRAG+VG DG TH G FD++F++ LPN ++AP DE ++MH + A + P FR+PRG+ +L ++ GK + L++ +A LGYG V + L+ + + + D F KPLD +L+ +LA + +I I E +GG SL Sbjct: 370 MAKEGFKPFIAIYSTFLQRAYDQVIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDE-QMMHNIMEYAYLHQGPIAFRYPRGS---FILDEEFNPCEIKFGKAQWLVKNSSEIAFLGYGQGVAKAWQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESL 563
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_DEIGD (1-deoxy-D-xylulose-5-phosphate synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=dxs PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 84/196 (42.86%), Postives = 116/196 (59.18%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 +A +G++P AIYS+FLQR YDQV+HDV ++ L V FA+DR G+VGADG TH G FD++++ +PN+ + P D AEL M+ A P R+PRGN P L G L +GD V IL G ++ + AA L V V +ARF KPLD ++R++A + L+TVE+ + VGGFGS Sbjct: 387 MALQGMRPIVAIYSTFLQRAYDQVLHDVAIENLNVTFAIDRGGIVGADGATHNGVFDLSYLRSIPNVGIGLPKDAAELRGMLKYAQE-HAGPFAIRYPRGN---VERVPEGTWPELRWGTWERLQDGDDVVILAGGKALEYALKAARDLP----GVGVVNARFVKPLDQGMLREVATKARALVTVEDNTVVGGFGS 574
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CAMJ8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=dxs PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 81/198 (40.91%), Postives = 118/198 (59.60%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGD-RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSVGGFGSL 588 +A EG KPF AIYS+FLQR YDQV+HD + L V FAMDRAG+VG DG TH G FD++F++ LPN ++AP DE ++M + A + P FR+PRG+ +L +++GK + L++ + +A LGYG V + L+ + + + D F KPLD +L+ +LA + +I I E +GG SL Sbjct: 370 MAKEGFKPFIAIYSTFLQRAYDQVIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDE-QMMQNIMEYAYLHQGPIAFRYPRGS---FILDKEFNPCEIKLGKAQWLVKNNSEIAFLGYGQGVAKAWQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESL 563
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CAMJR (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter jejuni (strain RM1221) GN=dxs PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.131e-34 Identity = 81/198 (40.91%), Postives = 117/198 (59.09%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSVGGFGSL 588 +A EG KPF AIYS+FLQR YDQV+HD + L V FAMDRAG+VG DG TH G FD++F++ LPN ++AP DE ++M + A + P FR+PRG+ +L +++GK + L++ +A LGYG V + L+ + + + D F KPLD +L+ +LA + +I I E +GG SL Sbjct: 370 MAKEGFKPFIAIYSTFLQRAYDQVIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDE-QMMQNIMEYAYLHQGPIAFRYPRGS---FILDKEFNPCEIKLGKAQWLVKNSSEIAFLGYGQGVAKAWQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESL 563
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CAMJJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=dxs PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.131e-34 Identity = 81/198 (40.91%), Postives = 117/198 (59.09%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSVGGFGSL 588 +A EG KPF AIYS+FLQR YDQV+HD + L V FAMDRAG+VG DG TH G FD++F++ LPN ++AP DE ++M + A + P FR+PRG+ +L +++GK + L++ +A LGYG V + L+ + + + D F KPLD +L+ +LA + +I I E +GG SL Sbjct: 370 MAKEGFKPFIAIYSTFLQRAYDQVIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDE-QMMQNIMEYAYLHQGPIAFRYPRGS---FILDKEFNPCEIKLGKAQWLVKNSSEIAFLGYGQGVAKAWQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESL 563 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |