CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_ARCB4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Arcobacter butzleri (strain RM4018) GN=dxs PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.131e-34 Identity = 83/180 (46.11%), Postives = 111/180 (61.67%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEG-DRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH 537 +A EG KPF IYS+FLQRG+DQ++HDV L LPV FAMDRAG+VG DG TH GAFDI+F+ +PNMV+ AP D L + A +++ P R+PR GA N TP +GK IL G +GYG+ V + + L ++DI TV D RF KPLD +L+ +L+ ++ Sbjct: 363 MAKEGFKPFITIYSTFLQRGFDQIIHDVCLMNLPVVFAMDRAGIVGNDGETHQGAFDISFLRFIPNMVLFAPRDNETLEQSLEFAYNLNN-PCAIRYPR----GAFKKLNFVPTPFVLGKAEILKTGISNKLFIGYGAGVSRAI-DTEALHNEDI--TVVDLRFVKPLDKNLLLELSKKY 534
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PSYCK (1-deoxy-D-xylulose-5-phosphate synthase OS=Psychrobacter cryohalolentis (strain K5) GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34 Identity = 87/206 (42.23%), Postives = 122/206 (59.22%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGA-VLPPNNKGTPLEIGKGRILMEGD---RVAILGYGSVVQQCVLAANM-----LKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSV-GGFGS 585 +A++GVKP AIYS+FLQRGYDQ++HDV LQ L V FA+DRAGLVG DG TH G FD F+ C+PNM++ AP DE E H++ T + R+PRG G GA ++ P E +L D ++A+L +G++V+ AA M L + + V + R+ KPLDT+L+ L + + T+EE + GG GS Sbjct: 418 MATQGVKPIVAIYSTFLQRGYDQLIHDVALQNLDVMFAIDRAGLVGEDGATHAGVFDFAFLRCVPNMLIAAPKDENECYHLLNTCYEYQG-CTAVRYPRGVGTGATIIQPAQIYNIGEAVIESVLGTDDAPKKLALLAFGTMVETAQKAAEMIAKSPLLASSCQLHVVNMRWVKPLDTNLLETLVEQGVTHIATLEEHMIMGGAGS 622
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_HELPG (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori (strain G27) GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34 Identity = 74/197 (37.56%), Postives = 113/197 (57.36%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGI--GAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGS 585 +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ + V P+ +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S Sbjct: 370 MAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHDSSPCAFRYPRGSFVLKEGVFEPSG----FVLGQSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPNLSAIVAPYQKLYVFSDNYKLGGVAS 562
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_DEIRA (1-deoxy-D-xylulose-5-phosphate synthase OS=Deinococcus radiodurans GN=dxs PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.143e-33 Identity = 84/195 (43.08%), Postives = 114/195 (58.46%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFG 582 +A +G++P AIYS+FLQR YDQV+HDV ++ L V F +DRAG+VGADG TH G FD++F+ +P + + P D AEL M+ A D P R+PRGN P L+ G+ L GD V IL G + + AA L V V +ARF KPLD +++R++ LITVE+ + VGGFG Sbjct: 383 MALQGMRPVVAIYSTFLQRAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYAQT-HDGPFAIRYPRGN---TAQVPAGTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAAEDLP----GVGVVNARFVKPLDEEMLREVGGRARALITVEDNTVVGGFG 569
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_HELPH (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori (strain HPAG1) GN=dxs PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.493e-33 Identity = 74/197 (37.56%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGI--GAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGS 585 +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ V P+ +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S Sbjct: 370 MAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHDSSPCAFRYPRGSFALKEGVFEPSG----FVLGRSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPNLSAIIAPYQKLYVFSDNYKLGGVAS 562
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CAMJE (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter jejuni GN=dxs PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.950e-33 Identity = 80/198 (40.40%), Postives = 117/198 (59.09%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGD-RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSVGGFGSL 588 +A EG KPF AIYS+FLQR YDQV+HD + L V FAMDRAG+VG DG TH G FD++F++ LPN ++AP DE ++M + A + P R+PRG+ +L +++GK + L++ + +A LGYG V + L+ + + + D F KPLD +L+ +LA + +I I E +GG SL Sbjct: 370 MAKEGFKPFIAIYSTFLQRAYDQVIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDE-QMMQNIMEYAYLHQGPIALRYPRGS---FILDKEFNPCEIKLGKAQWLVKNNSEIAFLGYGQGVAKAWQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESL 563
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_HELPY (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori GN=dxs PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.547e-33 Identity = 74/197 (37.56%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGI--GAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGS 585 +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ V P+ +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S Sbjct: 370 MAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHDSSPCAFRYPRGSFALKEGVFEPSG----FVLGQSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPNLSAIVAPYQKLYVFSDNYKLGGVAS 562
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_HELPJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori J99 GN=dxs PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.547e-33 Identity = 74/197 (37.56%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGI--GAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGS 585 +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ V P+ +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S Sbjct: 370 MAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVYFANEHDSSPCAFRYPRGSFALKEGVFEPSG----FVLGRSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDHNLSAIIAPYQKLYVFSDNYKLGGVAS 562
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_WOLSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Wolinella succinogenes GN=dxs PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.651e-32 Identity = 80/197 (40.61%), Postives = 113/197 (57.36%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEG-DRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 LA EG KPF AIYS+FLQR YDQ++HDV + KLPV+FA+DR G+VG DG TH G DI ++ +P+M +MAP L V A P FR+PR + + + +P GK LMEG D V +G+G+ V + + ++ S + V + D RF KPLD + + +L+ E+ + + S VGG S Sbjct: 363 LAKEGYKPFVAIYSTFLQRAYDQIIHDVGIMKLPVKFAIDRGGIVGEDGETHQGILDIGYLRLIPHMTLMAPRSNESLKEAVKFAKDFSLGPIAFRYPRKSFV--LQEGIFSESPFLYGKAERLMEGKDEVLFVGFGNGVGRAYEVSKVMAS-EYEVGLVDLRFVKPLDHETLWELSKEYRYWLVFSDASKVGGVAS 556
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_AZOPC (1-deoxy-D-xylulose-5-phosphate synthase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=dxs PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.816e-32 Identity = 69/196 (35.20%), Postives = 113/196 (57.65%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA EG+ PFC +YSSF+QR YD ++HD LQ L + +DRAGLVG DG TH G D+ ++ C+PN+ + AP +E +L +++ T A+ + F G G + L +GKGR L EG +A++ G++ A +++ ISV D + KP+D +L+ ++ + ++ +E+G++ GG G+ Sbjct: 386 LAKEGMIPFCNVYSSFMQRAYDNIIHDAVLQNLNMILCLDRAGLVGEDGVTHHGVLDLAYLRCIPNITITAPLNEKDLRNLMFT-AIQPNAKGVFVIRYPKGYGELKNWEYSFEALPVGKGRKLKEGKEIAVVSIGTIGNLARKAIRLVEKLGISVAHYDMIYLKPIDEELLHEIGKNYRCVVVIEDGTIKGGLGT 580 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |