CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CLOB8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=dxs PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.803e-32 Identity = 74/196 (37.76%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +AS G+KP A+YS+FLQR +DQV+HDV +Q LPV FA+DRAG+VG DG TH G D++++S +PN+ ++ P E + ++ A+ + P R+P+G I L P + + G+ I+ G +V I+ G +VQ ++A L + ++ TV +A F KP+D L+ + E ++T+E+ + GG GS Sbjct: 374 MASNGLKPVFAVYSTFLQRAFDQVLHDVCIQNLPVVFAIDRAGIVGEDGETHQGINDLSYLSMIPNIHIVVPKC-LEEVDVLLKWAINKNAPVAIRYPKGGNIIDTLSPIKE---VVEGQWEIVNRGSKVCIIATGRMVQHAMIAKEFLYEKGLNPTVINATFVKPIDKKLLENIKKEGYNILTIEDNIIKGGLGS 565
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_PARUW (1-deoxy-D-xylulose-5-phosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=dxs PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.018e-30 Identity = 73/195 (37.44%), Postives = 114/195 (58.46%), Query Frame = 1 Query: 16 VKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPL---EIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSL 588 +K +IY++FLQR +D V HD+ LQ+LPV FA+DRAG+ G DG TH G +DI+F++ +PNM++ P + +++ + +A RP+ R+P L P+ E+GKG +L+EG + I+ G + Q + ++L I TV D F KPLD++L +L H ++T+EE S V G GS+ Sbjct: 385 MKIVASIYATFLQRAFDNVFHDICLQELPVVFAIDRAGISGPDGSTHHGIYDISFLNAMPNMIIAQPRN-GQVLKELMESAFSWKRPTAIRYPN-------LMTEEFNHPICERELGKGEVLIEGTEILIVALGHMNQAALKVRDLLAQTGIEATVLDPIFVKPLDSELFCKLLLNHNKIVTIEEHSVVSGMGSI 571
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_STRGG (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=dxs PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.001e-29 Identity = 70/196 (35.71%), Postives = 114/196 (58.16%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 LA+ G+ P A+Y++FL R +DQV+ DV L K V F +DRAG+ G DG +H G +D++ + C+P + + AP D ++ + A +DD P+ RF +G +G + + ++I + D V I+ G++ C+ A++L +Q IS TV D R+ KP+D + + LA H +++TVE+ S GG GS Sbjct: 376 LATGGLHPVFAVYATFLNRAFDQVLMDVALHKCGVTFVLDRAGITGTDGASHNGMWDMSILQCVPTLRIAAPRDADQVRAQLREAVAVDDAPTVVRFSKG-AVGPAVKAVGRAGGMDILRRPTAARPD-VLIVSVGALAPMCLEIADLLDAQGISSTVVDPRWVKPVD-EALAPLAERHRVVVTVEDNSRAGGVGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_TREPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=dxs PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.308e-29 Identity = 75/197 (38.07%), Postives = 111/197 (56.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKG--TPLEIGKGRILMEGD--RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGG 576 LA GVKP A+YS+FLQR DQV+HDV +Q LPV FA+DRAG V DG TH G FD++ + +PN+ ++ P+ EL ++ A+ D P R+P+ A+ PP G TP+ G+G ++ + V ++ G V + AAN L + I + + RF KP+D D L + ++ VE+G +GG Sbjct: 377 LACAGVKPVVAVYSTFLQRAVDQVIHDVAVQNLPVIFALDRAGAVPHDGETHQGLFDLSILRAVPNINILCPASAHEL-SLLFGWALAQDTPVAIRYPK-----ALCPPEEDGFSTPVHTGRGVLITRENECNVLLVCTGGVFPEVTAAANTLARKGIFADIYNVRFVKPVDEDYFLDLVGRYRSVLFVEDGVKIGG 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_TREPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Treponema pallidum GN=dxs PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.308e-29 Identity = 75/197 (38.07%), Postives = 111/197 (56.35%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKG--TPLEIGKGRILMEGD--RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGG 576 LA GVKP A+YS+FLQR DQV+HDV +Q LPV FA+DRAG V DG TH G FD++ + +PN+ ++ P+ EL ++ A+ D P R+P+ A+ PP G TP+ G+G ++ + V ++ G V + AAN L + I + + RF KP+D D L + ++ VE+G +GG Sbjct: 377 LACAGVKPVVAVYSTFLQRAVDQVIHDVAVQNLPVIFALDRAGAVPHDGETHQGLFDLSILRAVPNINILCPASAHEL-SLLFGWALAQDTPVAIRYPK-----ALCPPEEDGFSTPVHTGRGVLITRENECNVLLVCTGGVFPEVTAAANTLARKGIFADIYNVRFVKPVDEDYFLDLVGRYRSVLFVEDGVKIGG 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCA9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=dxs PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.708e-29 Identity = 73/197 (37.06%), Postives = 115/197 (58.38%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEI-GKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQV+ DV L +LPV F +DRAG+ G+DG +H G +D++ ++ +P M V AP D + L + A +DD P+ RFP+G +G +P + ++I + + D V ++ GS + A+ L Q I VTV D R+ P+ ++ +LA +H +++T+E+ V GG GS Sbjct: 376 LAMGGLHPVVAIYSTFLNRAFDQVMMDVALHRLPVTFVLDRAGITGSDGASHNGMWDLSILNVVPGMRVAAPRDASRLREELTEALAVDDGPTALRFPKGE-VGEDIPAIERRDGVDILARPASGLHAD-VLLVAVGSFASTALATADRLGKQGIGVTVVDPRWVLPVPPHVV-ELAGQHRLVVTLEDSGVHGGAGS 569
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_TREDE (1-deoxy-D-xylulose-5-phosphate synthase OS=Treponema denticola GN=dxs PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.914e-29 Identity = 72/199 (36.18%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGD--RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSLY 591 LAS G+KP AIYS+FLQR DQ++HD +Q LPV FA+DRAG V ADG TH G FDI + +PNM ++ P+ E EL ++ + A++ D P R+P+ + +P ++ +E G+G ++ D R+ I G + + A+ +L + +S + + RF KP+D + + ++ ++ VE+G G S Y Sbjct: 378 LASAGMKPVTAIYSTFLQRSIDQIIHDTSIQNLPVIFAIDRAGPVPADGETHQGLFDIALLRPVPNMTILCPASEKEL-ELMLSWALMQDNPIAIRYPKAD-CPKEIPEFSQS--IEKGRGVLIKNSDKSRILITCTGGMYNEVKEASAILAHRGLSTDIYNVRFAKPIDENYFLNITKDYSYILFVEDGMKIGSLSSY 572
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS2_STRCO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Streptomyces coelicolor GN=dxs2 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.914e-29 Identity = 71/196 (36.22%), Postives = 114/196 (58.16%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 LA GV P A+Y++FL R +DQV+ DV L K V F +DRAG+ G DG +H G +D++ + +P + + AP D ++ + A V+DD P+ RF +G +G +P + +++ + D V ++ G++ C+ A++L Q IS TV D R+ KP+D + + LA H +++TVE+ S VGG GS Sbjct: 376 LAHGGVHPVFAVYATFLNRAFDQVLMDVALHKCGVTFVLDRAGVTGTDGASHNGMWDMSILQVVPGLRLAAPRDADQVRAQLREAVVVDDAPTVVRFSKG-AVGPAVPAVGRVGGMDVLRAPGTGTPD-VLLVSVGALAPMCLEVADLLNKQGISTTVVDPRWVKPVD-EAMAPLAERHRVVVTVEDNSRVGGVGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCS2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium smegmatis GN=dxs PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.970e-29 Identity = 71/196 (36.22%), Postives = 113/196 (57.65%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G DG +H G +D++ + +P + V AP D A L + A ++D P+ RFP+G+ +G +P + +++ V ++ GS + + A +L+SQ I VTV D R+ P+ + + LA +H++++TVE+ G GG GS Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQLMMDVALHKLPVTMVLDRAGITGPDGASHNGMWDLSILGIIPGIRVAAPRDGARLRAELGEALAVNDGPTAIRFPKGD-VGEDIPAVQRRDGVDVLAVPATGLTHDVLLVAVGSFAKMALAVAELLRSQGIGVTVVDPRWVLPV-PEALADLARDHKLVVTVEDNGLHGGIGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_FRASC (1-deoxy-D-xylulose-5-phosphate synthase OS=Frankia sp. (strain CcI3) GN=dxs PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.970e-29 Identity = 71/196 (36.22%), Postives = 110/196 (56.12%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA G+KP +Y++FL R +DQV+ DV L + PV F +DRAG+ G DG +H G +D++F+ +P + + AP D L + A D P+ RFP+G V + G + + + + V ++ G++ C+ A + SQ I +TV D R+ KPLD LI LA H++++TVE+ G VGG G+ Sbjct: 377 LAMGGLKPVVCLYATFLNRAFDQVLMDVALHRQPVTFVLDRAGITGEDGASHNGMWDLSFLQVVPGLAIAAPRDAPTLRAELREAVGDTDGPTVVRFPKGKVAVDVPAIDTVGGVDVLYRSPKVAQRREVLLVSIGAMAATCLEVAERVASQGIGITVVDPRWVKPLDPALI-DLARAHDLVVTVEDNGRVGGVGA 571 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |