CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_THEFY (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermobifida fusca (strain YX) GN=dxs PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.478e-29 Identity = 71/200 (35.50%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRIL------MEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFG 582 LA G+ P A+Y++FL R +DQV+ DV L + PV FA+DRAG+ G DG +H G +D++ + +PN+ + P D L ++ A IDD P+ R+P+G V+PP +IG +L E + ++ G + Q C A+ L Q I VTV D R+ KPLD L+ + A + + + G VG G Sbjct: 377 LAMGGLHPVVAVYATFLNRCFDQVLMDVALHRQPVTFALDRAGITGDDGASHNGMWDLSILQVVPNLSIAVPRDAVRLRELLREAISIDDGPTVVRYPKG-----VVPPAIPAVD-QIGGMDVLRRPASGTEAPDLLLVAVGPMAQTCCEVADRLADQGIGVTVVDPRWVKPLDPALVSEAARHSVVAVVEDNGRVGAVG 570
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium paratuberculosis GN=dxs PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.107e-28 Identity = 75/201 (37.31%), Postives = 114/201 (56.72%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPP-NNKGTPLEIGKGRILMEGD----RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L +LPV +DRAG+ G+DG +H G +D++ + +P M V AP D A L + A +DD P+ RFP+G+ +G +P +G+ L G + + V ++G G+ + A L Q I VTV D R+ P+ +D I +LA H++++T E+ V GG GS Sbjct: 375 LAMGGMHPVVAIYSTFLNRAFDQIMMDVALHRLPVTMVLDRAGITGSDGASHNGMWDLSILGVVPGMRVAAPRDAARLREELGEALDVDDGPTALRFPKGD-VGEDIPAIERRGSGLS-GVDVLALPASGCNHDVLLIGVGAFAPMALAVARRLADQGIGVTVVDPRWVLPV-SDSILELAARHKLVVTCEDNGVNGGVGS 572
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium avium (strain 104) GN=dxs PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.107e-28 Identity = 75/201 (37.31%), Postives = 114/201 (56.72%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPP-NNKGTPLEIGKGRILMEGD----RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L +LPV +DRAG+ G+DG +H G +D++ + +P M V AP D A L + A +DD P+ RFP+G+ +G +P +G+ L G + + V ++G G+ + A L Q I VTV D R+ P+ +D I +LA H++++T E+ V GG GS Sbjct: 375 LAMGGMHPVVAIYSTFLNRAFDQIMMDVALHRLPVTMVLDRAGITGSDGASHNGMWDLSILGVVPGMRVAAPRDAARLREELGEALDVDDGPTALRFPKGD-VGEDIPAIERRGSGLS-GVDVLALPASGCNHDVLLIGVGAFAPMALAVARRLADQGIGVTVVDPRWVLPV-SDSILELAARHKLVVTCEDNGVNGGVGS 572
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_FRASN (1-deoxy-D-xylulose-5-phosphate synthase OS=Frankia sp. (strain EAN1pec) GN=dxs PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.107e-28 Identity = 69/196 (35.20%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA G+KP IY++FL R +DQV+ DV + + PV F +DRAG+ G DG +H G +D++F+ +P + + AP D A L + A D P+ R+P+G + G + + V ++ G++ C+ A + SQ I +TV D R+ KPLD L+ LA +H++++TVE+ G VGG G+ Sbjct: 377 LAMGGLKPVVCIYATFLNRAFDQVLMDVAMHRQPVTFVLDRAGITGEDGASHNGMWDMSFLQVVPGLAIAAPRDAATLRAELDEAVSNTDGPTVVRYPKGKVAADSPAIDQVGGVDVLYRAPAAARHREVLLVSIGAMAPTCLDVAERVASQGIGITVVDPRWVKPLDPALV-DLARDHDLVVTVEDNGRVGGVGA 571
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCUA (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium ulcerans (strain Agy99) GN=dxs PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.446e-28 Identity = 70/196 (35.71%), Postives = 111/196 (56.63%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L +LPV +DRAG+ G+DGP+H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ +G +P + +++ V ++ G++ + A L +Q I VTV D R+ P+ D I LA H++++T+E+ V GG GS Sbjct: 375 LAMGGMHPVVAIYSTFLNRAFDQIMMDVALHQLPVTMVLDRAGITGSDGPSHNGMWDLSMLGIIPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDIPALERRDGMDVLAVPASGLNHDVLLIAVGALASMALAVAKRLHNQGIGVTVIDPRWVLPV-ADGIGDLAVAHKLVVTLEDNGVNGGVGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCGI (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium gilvum (strain PYR-GCK) GN=dxs PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.889e-28 Identity = 73/196 (37.24%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA G+ P A+YS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L +A A + D P+ RFP+G+ +G +P + +++ D V I+ G+ V A L+ Q I VTV D R+ P+ I LA H++++TVE+ G GG GS Sbjct: 375 LAMGGMHPVVALYSTFLNRAFDQMLMDVALHKLPVTMVLDRSGITGPDGASHNGMWDLSILGIVPGMRVAAPRDGARLREELAEAVEVKDGPTAVRFPKGD-VGEDIPAIERRDGVDVLAVPADGLSDDVLIIAVGAFAAMSVAVAERLRDQGIGVTVVDPRWVLPVPA-AINTLAAAHKLVVTVEDNGGHGGVGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CHLMU (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia muridarum GN=dxs PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.222e-28 Identity = 68/192 (35.42%), Postives = 108/192 (56.25%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGG 576 +A G C+IYS+FL R D V HDV +Q+LPV FA+DRAGL DG +H G +D+ F+ +PNMVV P + A ++ + ++++ P R+P + V P+ +P+ G+ +L +GD + ++ G + + L IS TV D F KPLDT+L++ L + H ++ +EE S+ G Sbjct: 380 IARSGTPVVCSIYSTFLNRAMDNVFHDVCMQELPVIFAIDRAGLAFHDGRSHHGIYDLGFLCSMPNMVVCQPRN-ASVLERLLFSSLLWKSPCAIRYPNLSTRKEVSNPS--FSPIFPGEAEVLCQGDDLLLIALGHMCDTALAVKEQLLDHGISTTVVDPIFIKPLDTELLQTLLSHHSKVVVLEEHSIHG 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCTU (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium tuberculosis GN=dxs PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28 Identity = 70/196 (35.71%), Postives = 112/196 (57.14%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ +G + + +++ V ++ G+ + A L +Q I VTV D R+ P+ +D +R+LA +H++L+T+E+ V GG GS Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPV-SDGVRELAVQHKLLVTLEDNGVNGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCTA (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=dxs PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28 Identity = 70/196 (35.71%), Postives = 112/196 (57.14%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ +G + + +++ V ++ G+ + A L +Q I VTV D R+ P+ +D +R+LA +H++L+T+E+ V GG GS Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPV-SDGVRELAVQHKLLVTLEDNGVNGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCBT (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=dxs PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28 Identity = 70/196 (35.71%), Postives = 112/196 (57.14%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ +G + + +++ V ++ G+ + A L +Q I VTV D R+ P+ +D +R+LA +H++L+T+E+ V GG GS Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPV-SDGVRELAVQHKLLVTLEDNGVNGGAGS 568 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |